RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PTPREP23469 700 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 KRT2P35908 639 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 FCGRTP55899 365 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 RPS6P62753 249 aaKnown RBP14.29□□□□□ -0.12
SHMT2-221ENST00000555773 LACTBP83111 547 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-221ENST00000555773 BAATQ14032 418 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-221ENST00000555773 WDR78Q5VTH9 848 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 NSMFQ6X4W1 530 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 GPR142Q7Z601 462 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 REXO1Q8N1G1 1221 aaKnown RBP14.29□□□□□ -0.12
SHMT2-221ENST00000555773 TBC1D5Q92609 795 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 MMP19Q99542 508 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 A1CFQ9NQ94 594 aaKnown RBP14.29□□□□□ -0.12
SHMT2-221ENST00000555773 CYP39A1Q9NYL5 469 aa14.29□□□□□ -0.12
SHMT2-221ENST00000555773 M0R2N6 131 aa14.28□□□□□ -0.12
SHMT2-221ENST00000555773 FKTNO75072 461 aa14.28□□□□□ -0.12
SHMT2-221ENST00000555773 DDIT3P35638 169 aa14.28□□□□□ -0.12
SHMT2-221ENST00000555773 CLK2P49760 499 aaKnown RBP14.28□□□□□ -0.12
SHMT2-221ENST00000555773 GUCY1B3Q02153 619 aa14.28□□□□□ -0.12
SHMT2-221ENST00000555773 AP3B2Q13367 1082 aa14.28□□□□□ -0.12
SHMT2-221ENST00000555773 NPY5RQ15761 445 aa14.28□□□□□ -0.12
SHMT2-221ENST00000555773 USP17L6PQ6QN14 398 aa14.28□□□□□ -0.12
SHMT2-221ENST00000555773 DIS3L2Q8IYB7 885 aaKnown RBP14.28□□□□□ -0.12
SHMT2-221ENST00000555773 SYTL5Q8TDW5 730 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-221ENST00000555773 SLC5A4Q9NY91 659 aa14.28□□□□□ -0.12
SHMT2-221ENST00000555773 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-221ENST00000555773 MTMR6Q9Y217 621 aa14.28□□□□□ -0.12
SHMT2-221ENST00000555773 THSD7BQ9C0I4 1608 aa14.27□□□□□ -0.12
SHMT2-221ENST00000555773 SPDYE3A6NKU9 549 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 BTBD18B2RXH4 712 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 POTEB2H3BUK9 544 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 GNRH1P01148 92 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 U2AF2P26368 475 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHMT2-221ENST00000555773 HOXD10P28358 340 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 PSMC4P43686 418 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 FOSBP53539 338 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 NUCB2P80303 420 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 GNL2Q13823 731 aaKnown RBP14.27□□□□□ -0.13
SHMT2-221ENST00000555773 GRB14Q14449 540 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 KRT25Q7Z3Z0 450 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 DNERQ8NFT8 737 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 ERO1AQ96HE7 468 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 EHMT1Q9H9B1 1298 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 BIN2Q9UBW5 565 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-221ENST00000555773 PCDHA6Q9UN73 950 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 DIS3Q9Y2L1 958 aaKnown RBP14.27□□□□□ -0.13
SHMT2-221ENST00000555773 PCDHA8Q9Y5H6 950 aa14.27□□□□□ -0.13
SHMT2-221ENST00000555773 DNAJC25-GNG10A0A024R161 153 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 LOC102724159A0A0B4J2E5 919 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 VPS37CA5D8V6 355 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-221ENST00000555773 B4DLN1 442 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 TNPO2O14787 897 aaKnown RBP14.26□□□□□ -0.13
SHMT2-221ENST00000555773 HOXA13P31271 388 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-221ENST00000555773 PWP2Q15269 919 aaKnown RBP14.26□□□□□ -0.13
SHMT2-221ENST00000555773 MORN1Q5T089 497 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 MCTP1Q6DN14 999 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 FCHSD1Q86WN1 690 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 FAM133AQ8N9E0 248 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 OXER1Q8TDS5 423 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 SOCS4Q8WXH5 440 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 NUDT12Q9BQG2 462 aa14.26□□□□□ -0.13
SHMT2-221ENST00000555773 ZSCAN16Q9H4T2 348 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-221ENST00000555773 ADD3Q9UEY8 706 aaKnown RBP14.26□□□□□ -0.13
SHMT2-221ENST00000555773 A0A0G2JMZ2 1700 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 CCDC194A0A1B0GVG4 234 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 BRD1O95696 1058 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 ZSCAN22P10073 491 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-221ENST00000555773 ADORA2AP29274 412 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 MAP2K5Q13163 448 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 UBE2SQ16763 222 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 JAKMIP3Q5VZ66 844 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 SLC30A10Q6XR72 485 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 BRAPQ7Z569 592 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 DPP9Q86TI2 863 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 NOSTRINQ8IVI9 506 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 NSUN6Q8TEA1 469 aaKnown RBP14.25□□□□□ -0.13
SHMT2-221ENST00000555773 ZNF296Q8WUU4 475 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-221ENST00000555773 USP6NLQ92738 828 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 TNFRSF25Q93038 417 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 IWS1Q96ST2 819 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 RMDN3Q96TC7 470 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 GJD2Q9UKL4 321 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 PARP14Q460N5 1801 aa14.25□□□□□ -0.13
SHMT2-221ENST00000555773 ADAMTS3O15072 1205 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 HOXC6P09630 235 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 NR5A1Q13285 461 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 NONOQ15233 471 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHMT2-221ENST00000555773 ZNF792Q3KQV3 632 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 XRRA1Q6P2D8 792 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 ZNF467Q7Z7K2 595 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-221ENST00000555773 RASGRP4Q8TDF6 673 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 TRIM47Q96LD4 638 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 TAAR1Q96RJ0 339 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 MPHOSPH6Q99547 160 aaKnown RBP14.24□□□□□ -0.13
SHMT2-221ENST00000555773 ANO3Q9BYT9 981 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 TMEM260Q9NX78 707 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 CHMP5Q9NZZ3 219 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 COL20A1Q9P218 1284 aa14.24□□□□□ -0.13
SHMT2-221ENST00000555773 ASB14A6NK59 587 aa14.23□□□□□ -0.13
SHMT2-221ENST00000555773 COBLO75128 1261 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms