RNA–Protein interactions for RNA: ENST00000555655.1

AL392023.1-201, humanhuman

TSL 3 BASIC

Gene AL392023.1, Length 531 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL392023.1-201ENST00000555655 NSUN3Q9H649 340 aaKnown RBP12.02□□□□□ -0.49
AL392023.1-201ENST00000555655 SCN10AQ9Y5Y9 1956 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 ABHD14A-ACY1A0A1B0GW23 586 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 NBNO60934 754 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 CYP2D6P10635 497 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 SIGLEC14Q08ET2 396 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 BFSP2Q13515 415 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 NFRKBQ6P4R8 1299 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 CNKSR3Q6P9H4 555 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 EP400NLQ6ZTU2 488 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 ANKRD35Q8N283 1001 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 SSH1Q8WYL5 1049 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 RMDN1Q96DB5 314 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 DYNLL2Q96FJ2 89 aa12.01□□□□□ -0.49
AL392023.1-201ENST00000555655 SRGAP3O43295 1099 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 NCK2O43639 380 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 TBX10O75333 385 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 SMAD4Q13485 552 aaKnown RBP12□□□□□ -0.49
AL392023.1-201ENST00000555655 CLUL1Q15846 466 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 TTC39AQ5SRH9 613 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 CPXCR1Q8N123 301 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 ADSSL1Q8N142 457 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 CHST13Q8NET6 341 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 NUP88Q99567 741 aaPredicted RBP12□□□□□ -0.49
AL392023.1-201ENST00000555655 SLF1Q9BQI6 1058 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 DBNDD2Q9BQY9 259 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 POLR3EQ9NVU0 708 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 SWAP70Q9UH65 585 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 INSL6Q9Y581 213 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 NAV1Q8NEY1 1877 aa12□□□□□ -0.49
AL392023.1-201ENST00000555655 EYA4O95677 639 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 PTPN11Q06124 597 aaPredicted RBP11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 RBL2Q08999 1139 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 HYAL1Q12794 435 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 PRPF38AQ8NAV1 312 aaKnown RBP11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 AFAP1L1Q8TED9 768 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 DHX38Q92620 1227 aaKnown RBP11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 MSLNLQ96KJ4 702 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 MEIS3Q99687 375 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 MTG1Q9BT17 334 aaPredicted RBP11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 SLC38A10Q9HBR0 1119 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 RAVER2Q9HCJ3 691 aaKnown RBP11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 A1CFQ9NQ94 594 aaKnown RBP11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 MCM9Q9NXL9 1143 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 FBXO40Q9UH90 709 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 ATG2AQ2TAZ0 1938 aa11.99□□□□□ -0.49
AL392023.1-201ENST00000555655 ASB14A6NK59 587 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 IDH1O75874 414 aaKnown RBP11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 PDGFBP01127 241 aaPredicted RBP11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 SLC4A3P48751 1232 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 GPM6BQ13491 265 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 DUSP28Q4G0W2 176 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 FAM47CQ5HY64 1035 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 CCDC158Q5M9N0 1113 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 FAM117BQ6P1L5 589 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 FBXO16Q8IX29 292 aaPredicted RBP11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 MORC4Q8TE76 937 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 CCDC17Q96LX7 622 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 SAMD11Q96NU1 681 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 KANSL2Q9H9L4 492 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 GOPCQ9HD26 462 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 DCP1AQ9NPI6 582 aaPredicted RBP11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 GPR108Q9NPR9 543 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 CHD8Q9HCK8 2581 aa11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 TPRP12270 2363 aaKnown RBP11.98□□□□□ -0.49
AL392023.1-201ENST00000555655 MYO7AQ13402 2215 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 SELPP16109 830 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 GTF2F1P35269 517 aaKnown RBP eCLIP11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 OAZ1P54368 228 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 TNNI3KQ59H18 835 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 TMED8Q6PL24 325 aaPredicted RBP11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 TRAF7Q6Q0C0 670 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 LRRC8DQ7L1W4 858 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 EEPD1Q7L9B9 569 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 DGLUCYQ7Z3D6 616 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 FRMD5Q7Z6J6 570 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 CAGE1Q8TC20 777 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 NKD2Q969F2 451 aaPredicted RBP11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 ANTXR1Q9H6X2 564 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 CD207Q9UJ71 328 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 HDAC5Q9UQL6 1122 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 FPGT-TNNI3KV9GXZ4 949 aa11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 TRIP12Q14669 1992 aaPredicted RBP11.97□□□□□ -0.49
AL392023.1-201ENST00000555655 ACACBO00763 2458 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 USP17L12C9JPN9 530 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 USP17L21D6R901 530 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 LINC01565O15544 149 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 EFCAB14O75071 495 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 PARNO95453 639 aaKnown RBP11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 MYL3P08590 195 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 ADAM15Q13444 863 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 IKBKEQ14164 716 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 TMEM192Q8IY95 271 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 CRBNQ96SW2 442 aa11.96□□□□□ -0.49
AL392023.1-201ENST00000555655 RBM47A0AV96 593 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms