RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 STAT2P52630 851 aa9.98□□□□□ -0.81
NEK9-206ENST00000555537 DUSP28Q4G0W2 176 aa9.98□□□□□ -0.81
NEK9-206ENST00000555537 RETREG2Q8NC44 543 aa9.98□□□□□ -0.81
NEK9-206ENST00000555537 GMCL1P1Q8NEA9 526 aa9.98□□□□□ -0.81
NEK9-206ENST00000555537 CHURC1Q8WUH1 139 aa9.98□□□□□ -0.81
NEK9-206ENST00000555537 STAG1Q8WVM7 1258 aa9.98□□□□□ -0.81
NEK9-206ENST00000555537 OSBP2Q969R2 916 aa9.98□□□□□ -0.81
NEK9-206ENST00000555537 WDR11Q9BZH6 1224 aa9.98□□□□□ -0.81
NEK9-206ENST00000555537 EPB41L4AQ9HCS5 686 aaPredicted RBP9.98□□□□□ -0.81
NEK9-206ENST00000555537 MTMR7Q9Y216 660 aa9.98□□□□□ -0.81
NEK9-206ENST00000555537 SMARCA5O60264 1052 aaPredicted RBP9.97□□□□□ -0.81
NEK9-206ENST00000555537 IL9P15248 144 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 SLC1A4P43007 532 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 MRE11P49959 708 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 DEFB103AP81534 67 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 TFAP4Q01664 338 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 BAATQ14032 418 aaPredicted RBP9.97□□□□□ -0.81
NEK9-206ENST00000555537 GPNMBQ14956 572 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 TCTN1Q2MV58 587 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 ZSCAN25Q6NSZ9 544 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 FAM178BQ8IXR5 827 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 RPAP2Q8IXW5 612 aaPredicted RBP9.97□□□□□ -0.81
NEK9-206ENST00000555537 GJD3Q8N144 294 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 OR6J1Q8NGC5 347 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.97□□□□□ -0.81
NEK9-206ENST00000555537 ANKS1AQ92625 1134 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 COPS5Q92905 334 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 MTG1Q9BT17 334 aaPredicted RBP9.97□□□□□ -0.81
NEK9-206ENST00000555537 ZBED2Q9BTP6 218 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 SUGCTQ9HAC7 445 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 VTA1Q9NP79 307 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 INCENPQ9NQS7 918 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 GPHNQ9NQX3 736 aaPredicted RBP9.97□□□□□ -0.81
NEK9-206ENST00000555537 POLR3EQ9NVU0 708 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 PRR12Q9ULL5 1215 aa9.97□□□□□ -0.81
NEK9-206ENST00000555537 TRANK1O15050 2925 aa9.96□□□□□ -0.81
NEK9-206ENST00000555537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.96□□□□□ -0.82
NEK9-206ENST00000555537 PRR33A8MZF0 331 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 RAB11FIP3O75154 756 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 TSPY3P0CV98 308 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 TSPY8P0CW00 308 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 FDX1P10109 184 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 KCNA5P22460 613 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 SSTR3P32745 418 aaPredicted RBP9.96□□□□□ -0.82
NEK9-206ENST00000555537 RFC2P35250 354 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 TDO2P48775 406 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 TKFCQ3LXA3 575 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 FAM117BQ6P1L5 589 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 FAM160B2Q86V87 743 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 NEDD1Q8NHV4 660 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 MORC4Q8TE76 937 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 UBE2ZQ9H832 354 aaPredicted RBP9.96□□□□□ -0.82
NEK9-206ENST00000555537 CCPG1Q9ULG6 757 aa9.96□□□□□ -0.82
NEK9-206ENST00000555537 NCOR1O75376 2440 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 M0R2C6 588 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 PITPNM1O00562 1244 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 NFIBO00712 420 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 NMT2O60551 498 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 SLC16A2P36021 539 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 KCNJ6P48051 423 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 CPT1AP50416 773 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 ALDH5A1P51649 535 aaPredicted RBP9.95□□□□□ -0.82
NEK9-206ENST00000555537 WDR5P61964 334 aaKnown RBP9.95□□□□□ -0.82
NEK9-206ENST00000555537 TTBK2Q6IQ55 1244 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 RCSD1Q6JBY9 416 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 GIMAP6Q6P9H5 292 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 IFNL3Q8IZI9 196 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 SEC62Q99442 399 aaKnown RBP9.95□□□□□ -0.82
NEK9-206ENST00000555537 PTPRSQ13332 1948 aa9.95□□□□□ -0.82
NEK9-206ENST00000555537 TET1Q8NFU7 2136 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 COL4A4P53420 1690 aaPredicted RBP9.94□□□□□ -0.82
NEK9-206ENST00000555537 RBM47A0AV96 593 aaKnown RBP9.94□□□□□ -0.82
NEK9-206ENST00000555537 PTPDC1A2A3K4 754 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 PATL2C9JE40 543 aaKnown RBP9.94□□□□□ -0.82
NEK9-206ENST00000555537 GPAA1O43292 621 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 BAIAP3O94812 1187 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 CALML3P27482 149 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 NHLH1Q02575 133 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 BFSP2Q13515 415 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 PTGISQ16647 500 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 CSPP1Q1MSJ5 1256 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 LEXMQ3ZCV2 418 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 TSHZ3Q63HK5 1081 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 PTCRAQ6ISU1 281 aaPredicted RBP9.94□□□□□ -0.82
NEK9-206ENST00000555537 GDF6Q6KF10 455 aaPredicted RBP9.94□□□□□ -0.82
NEK9-206ENST00000555537 NFRKBQ6P4R8 1299 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 APPBP2Q92624 585 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 GMCL1Q96IK5 515 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 FBXL18Q96ME1 805 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 CTAGE1Q96RT6 745 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 ZNF287Q9HBT7 754 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 IL17RBQ9NRM6 502 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 LMCD1Q9NZU5 365 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 SYNPO2Q9UMS6 1093 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 STX8Q9UNK0 236 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 NOD1Q9Y239 953 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 LCTP09848 1927 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 MYH7P12883 1935 aa9.94□□□□□ -0.82
NEK9-206ENST00000555537 LINC01553A4QN01 128 aa9.93□□□□□ -0.82
NEK9-206ENST00000555537 GRXCR2A6NFK2 248 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms