RNA–Protein interactions for RNA: ENST00000555371.1

NFKBIA-204, Transcript of NFKB inhibitor alpha, humanhuman

TSL 3

Gene NFKBIA, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-204ENST00000555371 CSPG5O95196 566 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 STAT3P40763 770 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 SMAD4Q13485 552 aaKnown RBP12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 TTC39AQ5SRH9 613 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 MAMDC4Q6UXC1 1216 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 AACSQ86V21 672 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 CLEC10AQ8IUN9 316 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 KIAA2013Q8IYS2 634 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 SPATA5Q8NB90 893 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 RETREG2Q8NC44 543 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 RAD9AQ99638 391 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 DBNDD2Q9BQY9 259 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 NSUN3Q9H649 340 aaKnown RBP12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 IL1RAPL2Q9NP60 686 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 FBXO28Q9NVF7 368 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 CTNNA3Q9UI47 895 aa12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 SUPT16HQ9Y5B9 1047 aaKnown RBP12.79□□□□□ -0.36
NFKBIA-204ENST00000555371 ZEB2O60315 1214 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 GJB5O95377 273 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 IQCF3P0C7M6 154 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 SUPT20HL2P0C7V6 817 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 SHMT1P34896 483 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 TNFAIP2Q03169 654 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 NBPF20Q3BBV1 942 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 FAM47CQ5HY64 1035 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 CCDC158Q5M9N0 1113 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 MCTP2Q6DN12 878 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 RHPN1Q8TCX5 695 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 AP5M1Q9H0R1 490 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 GPR108Q9NPR9 543 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 TLR7Q9NYK1 1049 aaKnown RBP12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 MICAL3Q7RTP6 2002 aa12.78□□□□□ -0.36
NFKBIA-204ENST00000555371 ZBTB22O15209 634 aa12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 DYNC1LI2O43237 492 aaPredicted RBP12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 UQCRFS1P1P0C7P4 283 aa12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 COL19A1Q14993 1142 aa12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 ACAP1Q15027 740 aa12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 CLASRPQ8N2M8 674 aaKnown RBP12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 SEZ6LQ9BYH1 1024 aa12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 ZNF214Q9UL59 606 aaPredicted RBP12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.37
NFKBIA-204ENST00000555371 RAB11FIP3O75154 756 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 TBX10O75333 385 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 IFIT2P09913 472 aaKnown RBP12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 COPB2P35606 906 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 USP5P45974 858 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 NKX3-2P78367 333 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 GPM6BQ13491 265 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 PUM1Q14671 1186 aaKnown RBP eCLIP12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 CCDC144CPQ8IYA2 1237 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 EAF2Q96CJ1 260 aaPredicted RBP12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 FGD4Q96M96 766 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 SNRKQ9NRH2 765 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 CD207Q9UJ71 328 aa12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 DBNLQ9UJU6 430 aaKnown RBP12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 FASNP49327 2511 aaKnown RBP12.76□□□□□ -0.37
NFKBIA-204ENST00000555371 DNAJC25-GNG10A0A024R161 153 aa12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 VWA5AO00534 786 aa12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 RAD21O60216 631 aa12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 ARID4AP29374 1257 aaPredicted RBP12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 TCTN1Q2MV58 587 aa12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 RALGAPA2Q2PPJ7 1873 aa12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 EPC2Q52LR7 807 aa12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 SNRNP48Q6IEG0 339 aaKnown RBP12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 ZNF467Q7Z7K2 595 aaPredicted RBP12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 KATNBL1Q9H079 304 aa12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 EHD4Q9H223 541 aa12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 IGFLR1Q9H665 355 aa12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 GNEQ9Y223 722 aaKnown RBP12.75□□□□□ -0.37
NFKBIA-204ENST00000555371 SCN10AQ9Y5Y9 1956 aa12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 WDR46O15213 610 aaKnown RBP12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 GTF2F1P35269 517 aaKnown RBP eCLIP12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 MCAMP43121 646 aa12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 PPP4CP60510 307 aa12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 TMEM105Q8N8V8 129 aa12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 KCNG4Q8TDN1 519 aa12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 LRRCC1Q9C099 1032 aa12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 RIPK3Q9Y572 518 aa12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 PCDHB15Q9Y5E8 787 aa12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 DDX49Q9Y6V7 483 aaKnown RBP12.74□□□□□ -0.37
NFKBIA-204ENST00000555371 LOC730098B7Z3J9 87 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 LINC01565O15544 149 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 MYL3P08590 195 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 SMPD1P17405 629 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 NUBP1P53384 320 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 IRX6P78412 446 aaPredicted RBP12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 HYAL1Q12794 435 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 BFSP2Q13515 415 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 REPS2Q8NFH8 660 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 HINFPQ9BQA5 517 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 VCPKMTQ9H867 229 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 INCENPQ9NQS7 918 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 PPP1R9AQ9ULJ8 1098 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 ADAMTS5Q9UNA0 930 aa12.73□□□□□ -0.37
NFKBIA-204ENST00000555371 NOD1Q9Y239 953 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms