RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SPATA9Q9BWV2 254 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 OSBPL2Q9H1P3 480 aa6.14□□□□□ -1.43
SCFD1-214ENST00000554819 ZNF552Q9H707 407 aaPredicted RBP6.14□□□□□ -1.43
SCFD1-214ENST00000554819 C7orf72A4D263 438 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 MEFVO15553 781 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-214ENST00000554819 EFEMP2O95967 443 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 FGFR1P11362 822 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 SSRP1Q08945 709 aaKnown RBP6.13□□□□□ -1.43
SCFD1-214ENST00000554819 MAP4K2Q12851 820 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 RASA3Q14644 834 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 KIR3DS1Q14943 382 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 SF1Q15637 639 aaKnown RBP6.13□□□□□ -1.43
SCFD1-214ENST00000554819 ACBD5Q5T8D3 534 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-214ENST00000554819 OLFML2BQ68BL8 750 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 OGFOD2Q6N063 350 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 SPATC1Q76KD6 591 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 POU5F2Q8N7G0 328 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 FBXO15Q8NCQ5 510 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-214ENST00000554819 NPLOC4Q8TAT6 608 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 FAM84AQ96KN4 292 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 IPO9Q96P70 1041 aaKnown RBP6.13□□□□□ -1.43
SCFD1-214ENST00000554819 SLC26A8Q96RN1 970 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 SLC38A3Q99624 504 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 IER2Q9BTL4 223 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 SNTG2Q9NY99 539 aa6.13□□□□□ -1.43
SCFD1-214ENST00000554819 HRKO00198 91 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 GRIA2P42262 883 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 CYP4F3Q08477 520 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 KCNAB2Q13303 367 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 NR1I3Q14994 352 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 TESK1Q15569 626 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 CABP7Q86V35 215 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 PPIL6Q8IXY8 311 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 LZTR1Q8N653 840 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 TMEM145Q8NBT3 493 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 KREMEN2Q8NCW0 462 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 DIO2Q92813 273 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 KRTAP9-9Q9BYP9 154 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 ARHGEF4Q9NR80 690 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 PFDN2Q9UHV9 154 aa6.12□□□□□ -1.43
SCFD1-214ENST00000554819 KDM2BQ8NHM5 1336 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 PRODHO43272 600 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 MYO1BO43795 1136 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 PEX10O60683 326 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 MSL3P1P0C860 447 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 LTBRP36941 435 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 RANGAP1P46060 587 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-214ENST00000554819 GTF2A2P52657 109 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 LONRF2Q1L5Z9 754 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 PRSS53Q2L4Q9 553 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 ZC3H12BQ5HYM0 836 aaKnown RBP6.11□□□□□ -1.43
SCFD1-214ENST00000554819 SLC35F1Q5T1Q4 408 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 BICRALQ6AI39 1079 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 NSMFQ6X4W1 530 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 DPH6Q7L8W6 267 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 ZNF605Q86T29 641 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 ZBTB38Q8NAP3 1195 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-214ENST00000554819 USP33Q8TEY7 942 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 TNFRSF12AQ9NP84 129 aa6.11□□□□□ -1.43
SCFD1-214ENST00000554819 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCFD1-214ENST00000554819 TIMM13Q9Y5L4 95 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-214ENST00000554819 FAM221BA6H8Z2 402 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 SRGAP3O43295 1099 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 DLX3O60479 287 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 CYBBP04839 570 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 PABPC1P11940 636 aaKnown RBP6.1□□□□□ -1.43
SCFD1-214ENST00000554819 RPL11P62913 178 aaKnown RBP6.1□□□□□ -1.43
SCFD1-214ENST00000554819 MESP2Q0VG99 397 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 RAB3GAP1Q15042 981 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 TMEM132EQ6IEE7 984 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 PAQR3Q6TCH7 311 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 SCUBE1Q8IWY4 988 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 BHLHE22Q8NFJ8 381 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-214ENST00000554819 PPP1R16BQ96T49 567 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 DNAJC7Q99615 494 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 CDC6Q99741 560 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 GULP1Q9UBP9 304 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 CDK11AQ9UQ88 783 aaPredicted RBP6.1□□□□□ -1.43
SCFD1-214ENST00000554819 RWDD3Q9Y3V2 267 aa6.1□□□□□ -1.43
SCFD1-214ENST00000554819 NUDT19A8MXV4 375 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 SDHBP21912 280 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 TACR1P25103 407 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 YBX1P67809 324 aaKnown RBP6.09□□□□□ -1.43
SCFD1-214ENST00000554819 CBX2Q14781 532 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-214ENST00000554819 PKN1Q16512 942 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 INF2Q27J81 1249 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 CCDC103Q8IW40 242 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 DCAF4Q8WV16 495 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 KCNN1Q92952 543 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 C1orf159Q96HA4 380 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 MRFAP1L1Q96HT8 127 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 MTA3Q9BTC8 594 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 LNPKQ9C0E8 428 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 ZSWIM4Q9H7M6 989 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 TMEFF2Q9UIK5 374 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-214ENST00000554819 NPFFR2Q9Y5X5 522 aa6.09□□□□□ -1.43
SCFD1-214ENST00000554819 TEX51A0A1B0GUA7 166 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 ADCY3O60266 1144 aa6.08□□□□□ -1.44
SCFD1-214ENST00000554819 DIAPH1O60610 1272 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms