RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 STAG2Q8N3U4 1231 aa18.39■□□□□ 0.53
GABRB3-207ENST00000554722 CDX2Q99626 313 aaPredicted RBP18.39■□□□□ 0.53
GABRB3-207ENST00000554722 CNNM2Q9H8M5 875 aa18.39■□□□□ 0.53
GABRB3-207ENST00000554722 KIAA1217Q5T5P2 1943 aa18.39■□□□□ 0.53
GABRB3-207ENST00000554722 ASB14A6NK59 587 aa18.38■□□□□ 0.53
GABRB3-207ENST00000554722 NT5C2P49902 561 aa18.38■□□□□ 0.53
GABRB3-207ENST00000554722 EPHB4P54760 987 aa18.38■□□□□ 0.53
GABRB3-207ENST00000554722 USH1GQ495M9 461 aa18.38■□□□□ 0.53
GABRB3-207ENST00000554722 TAPT1Q6NXT6 567 aa18.38■□□□□ 0.53
GABRB3-207ENST00000554722 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.38■□□□□ 0.53
GABRB3-207ENST00000554722 FBXO16Q8IX29 292 aaPredicted RBP18.38■□□□□ 0.53
GABRB3-207ENST00000554722 ADGRF4Q8IZF3 695 aa18.38■□□□□ 0.53
GABRB3-207ENST00000554722 TBC1D5Q92609 795 aa18.38■□□□□ 0.53
GABRB3-207ENST00000554722 MAP4K1Q92918 833 aa18.38■□□□□ 0.53
GABRB3-207ENST00000554722 TMEM265A0A087WTH1 108 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
GABRB3-207ENST00000554722 PTPDC1A2A3K4 754 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 E7EWF7 191 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 TIMP1P01033 207 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 CDK7P50613 346 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 ALDH5A1P51649 535 aaPredicted RBP18.37■□□□□ 0.53
GABRB3-207ENST00000554722 BEX3Q00994 111 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 COL9A3Q14050 684 aaPredicted RBP18.37■□□□□ 0.53
GABRB3-207ENST00000554722 CDC37Q16543 378 aaPredicted RBP18.37■□□□□ 0.53
GABRB3-207ENST00000554722 IFIT1BQ5T764 474 aaKnown RBP18.37■□□□□ 0.53
GABRB3-207ENST00000554722 NOL8Q76FK4 1167 aaKnown RBP18.37■□□□□ 0.53
GABRB3-207ENST00000554722 CHST3Q7LGC8 479 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 MORC4Q8TE76 937 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 UBAC1Q9BSL1 405 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 TBX21Q9UL17 535 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 GNEQ9Y223 722 aaKnown RBP18.37■□□□□ 0.53
GABRB3-207ENST00000554722 U3KPZ7 1027 aaPredicted RBP18.37■□□□□ 0.53
GABRB3-207ENST00000554722 WDR19Q8NEZ3 1342 aa18.37■□□□□ 0.53
GABRB3-207ENST00000554722 MYH7BA7E2Y1 1941 aa18.36■□□□□ 0.53
GABRB3-207ENST00000554722 ARVCFO00192 962 aa18.36■□□□□ 0.53
GABRB3-207ENST00000554722 TLR3O15455 904 aaKnown RBP18.36■□□□□ 0.53
GABRB3-207ENST00000554722 SMPD1P17405 629 aa18.36■□□□□ 0.53
GABRB3-207ENST00000554722 CALML3P27482 149 aa18.36■□□□□ 0.53
GABRB3-207ENST00000554722 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
GABRB3-207ENST00000554722 TNFAIP2Q03169 654 aa18.36■□□□□ 0.53
GABRB3-207ENST00000554722 SLC35G1Q2M3R5 365 aa18.36■□□□□ 0.53
GABRB3-207ENST00000554722 ASPRV1Q53RT3 343 aa18.36■□□□□ 0.53
GABRB3-207ENST00000554722 VAT1LQ9HCJ6 419 aa18.36■□□□□ 0.53
GABRB3-207ENST00000554722 RBM8AQ9Y5S9 174 aaKnown RBP18.36■□□□□ 0.53
GABRB3-207ENST00000554722 PARP1P09874 1014 aaKnown RBP18.35■□□□□ 0.53
GABRB3-207ENST00000554722 ANTXR2P58335 489 aa18.35■□□□□ 0.53
GABRB3-207ENST00000554722 NKX3-2P78367 333 aa18.35■□□□□ 0.53
GABRB3-207ENST00000554722 PPIGQ13427 754 aaKnown RBP eCLIP18.35■□□□□ 0.53
GABRB3-207ENST00000554722 QRICH1Q2TAL8 776 aa18.35■□□□□ 0.53
GABRB3-207ENST00000554722 MFSD5Q6N075 450 aa18.35■□□□□ 0.53
GABRB3-207ENST00000554722 RNF207Q6ZRF8 634 aa18.35■□□□□ 0.53
GABRB3-207ENST00000554722 LSG1Q9H089 658 aaKnown RBP18.35■□□□□ 0.53
GABRB3-207ENST00000554722 TTYH1Q9H313 450 aaPredicted RBP18.35■□□□□ 0.53
GABRB3-207ENST00000554722 JMJD4Q9H9V9 463 aa18.35■□□□□ 0.53
GABRB3-207ENST00000554722 MAD2L2Q9UI95 211 aa18.35■□□□□ 0.53
GABRB3-207ENST00000554722 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.34■□□□□ 0.53
GABRB3-207ENST00000554722 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.34■□□□□ 0.53
GABRB3-207ENST00000554722 MAFAQ8NHW3 353 aaPredicted RBP18.34■□□□□ 0.53
GABRB3-207ENST00000554722 MYLIPQ8WY64 445 aa18.34■□□□□ 0.53
GABRB3-207ENST00000554722 AP5M1Q9H0R1 490 aa18.34■□□□□ 0.53
GABRB3-207ENST00000554722 CABYRO75952 493 aa18.33■□□□□ 0.52
GABRB3-207ENST00000554722 TRDNQ13061 729 aa18.33■□□□□ 0.52
GABRB3-207ENST00000554722 KIAA1211Q6ZU35 1233 aa18.33■□□□□ 0.52
GABRB3-207ENST00000554722 CENPQQ7L2Z9 268 aaPredicted RBP18.33■□□□□ 0.52
GABRB3-207ENST00000554722 TLK2Q86UE8 772 aa18.33■□□□□ 0.52
GABRB3-207ENST00000554722 FAM126BQ8IXS8 530 aa18.33■□□□□ 0.52
GABRB3-207ENST00000554722 MB21D2Q8IYB1 491 aaPredicted RBP18.33■□□□□ 0.52
GABRB3-207ENST00000554722 TMEM199Q8N511 208 aa18.33■□□□□ 0.52
GABRB3-207ENST00000554722 NCOA7Q8NI08 942 aa18.33■□□□□ 0.52
GABRB3-207ENST00000554722 ESYT1Q9BSJ8 1104 aa18.33■□□□□ 0.52
GABRB3-207ENST00000554722 GPHNQ9NQX3 736 aaPredicted RBP18.33■□□□□ 0.52
GABRB3-207ENST00000554722 COL20A1Q9P218 1284 aa18.33■□□□□ 0.52
GABRB3-207ENST00000554722 PALM3A6NDB9 673 aaPredicted RBP18.32■□□□□ 0.52
GABRB3-207ENST00000554722 KLRF2D3W0D1 207 aa18.32■□□□□ 0.52
GABRB3-207ENST00000554722 IFIT3O14879 490 aaKnown RBP18.32■□□□□ 0.52
GABRB3-207ENST00000554722 DYNC1LI2O43237 492 aaPredicted RBP18.32■□□□□ 0.52
GABRB3-207ENST00000554722 ZEB2O60315 1214 aa18.32■□□□□ 0.52
GABRB3-207ENST00000554722 PPP1R11O60927 126 aaPredicted RBP18.32■□□□□ 0.52
GABRB3-207ENST00000554722 FOSL2P15408 326 aa18.32■□□□□ 0.52
GABRB3-207ENST00000554722 FSCN1Q16658 493 aaKnown RBP18.32■□□□□ 0.52
GABRB3-207ENST00000554722 IQSEC1Q6DN90 963 aa18.32■□□□□ 0.52
GABRB3-207ENST00000554722 MTMR8Q96EF0 704 aa18.32■□□□□ 0.52
GABRB3-207ENST00000554722 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.32■□□□□ 0.52
GABRB3-207ENST00000554722 SEZ6LQ9BYH1 1024 aa18.32■□□□□ 0.52
GABRB3-207ENST00000554722 VTA1Q9NP79 307 aa18.32■□□□□ 0.52
GABRB3-207ENST00000554722 ADD3Q9UEY8 706 aaKnown RBP18.32■□□□□ 0.52
GABRB3-207ENST00000554722 ABCB11O95342 1321 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 EYSQ5T1H1 3165 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 PRUNE2Q8WUY3 3088 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 OPLAHO14841 1288 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 DHX16O60231 1041 aaKnown RBP18.31■□□□□ 0.52
GABRB3-207ENST00000554722 EDNRBP24530 442 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 DNAJB2P25686 324 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 GRM4Q14833 912 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 CXCL17Q6UXB2 119 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 IGDCC4Q8TDY8 1250 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 TAAR1Q96RJ0 339 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 PPP1R12CQ9BZL4 782 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 PNMA2Q9UL42 364 aa18.31■□□□□ 0.52
GABRB3-207ENST00000554722 Q9Y3F1 56 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms