RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 DLL1O00548 723 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 ZBTB5O15062 677 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
SHMT2-213ENST00000554600 DDAH1O94760 285 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 CFBP00751 764 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 RXRAP19793 462 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 KIF5BP33176 963 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 MRPL12P52815 198 aaKnown RBP12.38□□□□□ -0.43
SHMT2-213ENST00000554600 RTP1P59025 263 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 FGD1P98174 961 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 TROAPQ12815 778 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 MCF2L2Q86YR7 1114 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 TBC1D5Q92609 795 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 VTI1AQ96AJ9 217 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 MTA3Q9BTC8 594 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 COLQQ9Y215 455 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-213ENST00000554600 PCDHA1Q9Y5I3 950 aa12.38□□□□□ -0.43
SHMT2-213ENST00000554600 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-213ENST00000554600 ADCY6O43306 1168 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 REC8O95072 547 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 TRAF1Q13077 416 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 COL9A3Q14050 684 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-213ENST00000554600 KRT32Q14532 448 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 GNASQ5JWF2 1037 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 SYNE3Q6ZMZ3 975 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 TCEANC2Q96MN5 208 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 KATNBL1Q9H079 304 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 AP5M1Q9H0R1 490 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 VTA1Q9NP79 307 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 PDGFCQ9NRA1 345 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 PRKAG2Q9UGJ0 569 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 NAP1L2Q9ULW6 460 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-213ENST00000554600 PHF24Q9UPV7 400 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 SLC12A7Q9Y666 1083 aa12.37□□□□□ -0.43
SHMT2-213ENST00000554600 PNMA6FA0A0J9YX94 578 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 A0A1W2PQ45 241 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-213ENST00000554600 A0A1W2PQY0 241 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 MYADML2A6NDP7 307 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 ADAMTS4O75173 837 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 CALM1P0DP23 149 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 CALM2P0DP24 149 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 CALM3P0DP25 149 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-213ENST00000554600 KCNA10Q16322 511 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 ADCK5Q3MIX3 580 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 SLC39A5Q6ZMH5 540 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 MICU3Q86XE3 530 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 PCSK9Q8NBP7 692 aaKnown RBP12.36□□□□□ -0.43
SHMT2-213ENST00000554600 RGS22Q8NE09 1264 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 DNERQ8NFT8 737 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 SYTL5Q8TDW5 730 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-213ENST00000554600 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
SHMT2-213ENST00000554600 RIOX1Q9H6W3 641 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 PRDM5Q9NQX1 630 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-213ENST00000554600 SEC63Q9UGP8 760 aaKnown RBP12.36□□□□□ -0.43
SHMT2-213ENST00000554600 KAT6AQ92794 2004 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 LTBP2Q14767 1821 aa12.36□□□□□ -0.43
SHMT2-213ENST00000554600 LOC102724159A0A0B4J2E5 919 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 DYNC1LI2O43237 492 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-213ENST00000554600 CYTH3O43739 400 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-213ENST00000554600 SMPD1P17405 629 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 LIFRP42702 1097 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 GNAQP50148 359 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 ACLYP53396 1101 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 GJA9P57773 515 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 BEX3Q00994 111 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 PWP2Q15269 919 aaKnown RBP12.35□□□□□ -0.43
SHMT2-213ENST00000554600 SLC35G1Q2M3R5 365 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 ARHGEF16Q5VV41 709 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 IQSEC1Q6DN90 963 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 TAPT1Q6NXT6 567 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 DHX32Q7L7V1 743 aaKnown RBP12.35□□□□□ -0.43
SHMT2-213ENST00000554600 TLK2Q86UE8 772 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
SHMT2-213ENST00000554600 MORC4Q8TE76 937 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 NSUN6Q8TEA1 469 aaKnown RBP12.35□□□□□ -0.43
SHMT2-213ENST00000554600 MTMR8Q96EF0 704 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
SHMT2-213ENST00000554600 TAAR1Q96RJ0 339 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 RMDN3Q96TC7 470 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 MAP3K14Q99558 947 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 LZTS2Q9BRK4 669 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 TSEN34Q9BSV6 310 aaKnown RBP12.35□□□□□ -0.43
SHMT2-213ENST00000554600 WDR11Q9BZH6 1224 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 UPF3AQ9H1J1 476 aaKnown RBP12.35□□□□□ -0.43
SHMT2-213ENST00000554600 STARD7Q9NQZ5 370 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 DNAH12Q6ZR08 3092 aa12.35□□□□□ -0.43
SHMT2-213ENST00000554600 TRIP12Q14669 1992 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-213ENST00000554600 MOXD2PA6NHM9 499 aa12.34□□□□□ -0.43
SHMT2-213ENST00000554600 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
SHMT2-213ENST00000554600 ASGR1P07306 291 aa12.34□□□□□ -0.43
SHMT2-213ENST00000554600 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
SHMT2-213ENST00000554600 EIF2AK2P19525 551 aaKnown RBP12.34□□□□□ -0.43
SHMT2-213ENST00000554600 PTGS1P23219 599 aa12.34□□□□□ -0.43
SHMT2-213ENST00000554600 HOXA13P31271 388 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-213ENST00000554600 PPP2R5BQ15173 497 aa12.34□□□□□ -0.43
SHMT2-213ENST00000554600 CCDC82Q8N4S0 544 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms