RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 MEFVO15553 781 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-211ENST00000554437 DLX3O60479 287 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 GLI1P08151 1106 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 PABPC1P11940 636 aaKnown RBP7.61□□□□□ -1.19
SCFD1-211ENST00000554437 PRKCAP17252 672 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 GALK1P51570 392 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 KIR3DS1Q14943 382 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 NLRX1Q86UT6 975 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 LILRB2Q8N423 598 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 KREMEN2Q8NCW0 462 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 NUP43Q8NFH3 380 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 IMPACTQ9P2X3 320 aa7.61□□□□□ -1.19
SCFD1-211ENST00000554437 IGSF3O75054 1194 aa7.6□□□□□ -1.19
SCFD1-211ENST00000554437 EFEMP2O95967 443 aa7.6□□□□□ -1.19
SCFD1-211ENST00000554437 MAP4K2Q12851 820 aa7.6□□□□□ -1.19
SCFD1-211ENST00000554437 PPIL6Q8IXY8 311 aa7.6□□□□□ -1.19
SCFD1-211ENST00000554437 THAP3Q8WTV1 239 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-211ENST00000554437 OSBP2Q969R2 916 aa7.6□□□□□ -1.19
SCFD1-211ENST00000554437 SHISA4Q96DD7 197 aa7.6□□□□□ -1.19
SCFD1-211ENST00000554437 ASIC4Q96FT7 647 aa7.6□□□□□ -1.19
SCFD1-211ENST00000554437 MMP19Q99542 508 aa7.6□□□□□ -1.19
SCFD1-211ENST00000554437 TMEFF2Q9UIK5 374 aaPredicted RBP7.6□□□□□ -1.19
SCFD1-211ENST00000554437 NPHS1O60500 1241 aa7.59□□□□□ -1.19
SCFD1-211ENST00000554437 CYP4F8P98187 520 aa7.59□□□□□ -1.19
SCFD1-211ENST00000554437 SLC35F1Q5T1Q4 408 aa7.59□□□□□ -1.19
SCFD1-211ENST00000554437 FOXB2Q5VYV0 432 aa7.59□□□□□ -1.19
SCFD1-211ENST00000554437 E4F1Q66K89 784 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-211ENST00000554437 IQCEQ6IPM2 695 aa7.59□□□□□ -1.19
SCFD1-211ENST00000554437 DENND5AQ6IQ26 1287 aa7.59□□□□□ -1.19
SCFD1-211ENST00000554437 DIO2Q92813 273 aa7.59□□□□□ -1.19
SCFD1-211ENST00000554437 C1orf159Q96HA4 380 aa7.59□□□□□ -1.19
SCFD1-211ENST00000554437 ACSL6Q9UKU0 697 aa7.59□□□□□ -1.19
SCFD1-211ENST00000554437 TRBV23-1A0A0A0MS06 115 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 A0A1W2PQJ5 194 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 MVKQ03426 396 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 KCNAB2Q13303 367 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 LONRF2Q1L5Z9 754 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 INF2Q27J81 1249 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 FAM209AQ5JX71 171 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 ACBD5Q5T8D3 534 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-211ENST00000554437 MBLAC2Q68D91 279 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 MPZL3Q6UWV2 235 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 USP53Q70EK8 1073 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 SCUBE1Q8IWY4 988 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 SLC26A8Q96RN1 970 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 CRTAC1Q9NQ79 661 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 YBX2Q9Y2T7 364 aaKnown RBP7.58□□□□□ -1.2
SCFD1-211ENST00000554437 CARMIL2Q6F5E8 1435 aa7.58□□□□□ -1.2
SCFD1-211ENST00000554437 C7orf72A4D263 438 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 ARNTLO00327 626 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 MSL3P1P0C860 447 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 PNLIPP16233 465 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 LTBRP36941 435 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 ARL4AP40617 200 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 C2orf27AQ580R0 203 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 ZC3H12BQ5HYM0 836 aaKnown RBP7.57□□□□□ -1.2
SCFD1-211ENST00000554437 CCDC103Q8IW40 242 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 ZSWIM2Q8NEG5 633 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 NLGN2Q8NFZ4 835 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 LIN37Q96GY3 246 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-211ENST00000554437 SLC6A17Q9H1V8 727 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 GULP1Q9UBP9 304 aa7.57□□□□□ -1.2
SCFD1-211ENST00000554437 BLACEA4D250 179 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 ZNF503-AS2A6NEH8 195 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 TACR1P25103 407 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 PDE6BP35913 854 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 CORO7P57737 925 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 JMYQ8N9B5 988 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 INTS4Q96HW7 963 aaKnown RBP7.56□□□□□ -1.2
SCFD1-211ENST00000554437 EXOC2Q96KP1 924 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 DHRS4Q9BTZ2 278 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 PDLIM7Q9NR12 457 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 BTG4Q9NY30 223 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 RWDD3Q9Y3V2 267 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 PTCH2Q9Y6C5 1203 aa7.56□□□□□ -1.2
SCFD1-211ENST00000554437 MYO1BO43795 1136 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 LCP1P13796 627 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 SUMO1P63165 101 aaKnown RBP7.55□□□□□ -1.2
SCFD1-211ENST00000554437 TESK1Q15569 626 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 ADGRF1Q5T601 910 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 BICRALQ6AI39 1079 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 LZTR1Q8N653 840 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 RCBTB1Q8NDN9 531 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 USP33Q8TEY7 942 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 SH3TC2Q8TF17 1288 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 DCAF4Q8WV16 495 aa7.55□□□□□ -1.2
SCFD1-211ENST00000554437 MRPS23Q9Y3D9 190 aaKnown RBP7.55□□□□□ -1.2
SCFD1-211ENST00000554437 TIMM13Q9Y5L4 95 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-211ENST00000554437 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.55□□□□□ -1.2
SCFD1-211ENST00000554437 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-211ENST00000554437 PPP1R11O60927 126 aaPredicted RBP7.54□□□□□ -1.2
SCFD1-211ENST00000554437 SDHBP21912 280 aa7.54□□□□□ -1.2
SCFD1-211ENST00000554437 RPL11P62913 178 aaKnown RBP7.54□□□□□ -1.2
SCFD1-211ENST00000554437 NTRK3Q16288 839 aa7.54□□□□□ -1.2
SCFD1-211ENST00000554437 NOP9Q86U38 636 aaKnown RBP7.54□□□□□ -1.2
SCFD1-211ENST00000554437 DPF3Q92784 378 aa7.54□□□□□ -1.2
SCFD1-211ENST00000554437 CHAMP1Q96JM3 812 aa7.54□□□□□ -1.2
SCFD1-211ENST00000554437 KANSL2Q9H9L4 492 aa7.54□□□□□ -1.2
SCFD1-211ENST00000554437 FAM53CQ9NYF3 392 aa7.54□□□□□ -1.2
SCFD1-211ENST00000554437 MARCH2Q9P0N8 246 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms