RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 LAPTM5Q13571 262 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 ZNF460Q14592 562 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 FNDC3BQ53EP0 1204 aaKnown RBP7.38□□□□□ -1.23
CHD8-207ENST00000554384 TM4SF20Q53R12 229 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 EEF1DP3Q658K8 133 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 CNNM4Q6P4Q7 775 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 KSR1Q8IVT5 923 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 NAT16Q8N8M0 369 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 GSTCDQ8NEC7 633 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 PTPRN2Q92932 1015 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 FMNL2Q96PY5 1086 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 G6PC3Q9BUM1 346 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 FAM126AQ9BYI3 521 aaPredicted RBP7.38□□□□□ -1.23
CHD8-207ENST00000554384 SLAMF8Q9P0V8 285 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 FBXL7Q9UJT9 491 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 TNPO3Q9Y5L0 923 aaKnown RBP7.38□□□□□ -1.23
CHD8-207ENST00000554384 A0A087X0B3 334 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 DNAJC6O75061 913 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 RFPL3O75679 317 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 CRTAMO95727 393 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 PAMP19021 973 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 SPINK2P20155 84 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 GRIK1P39086 918 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 GABREP78334 506 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 ZP2Q05996 745 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 TRIM61Q5EBN2 209 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 RNF187Q5TA31 235 aaPredicted RBP7.37□□□□□ -1.23
CHD8-207ENST00000554384 RCBTB1Q8NDN9 531 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 DCAF4Q8WV16 495 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 MFSD3Q96ES6 412 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 SPC25Q9HBM1 224 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 PPARGC1AQ9UBK2 798 aaKnown RBP7.37□□□□□ -1.23
CHD8-207ENST00000554384 CCDC39Q9UFE4 941 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 SLC5A6Q9Y289 635 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 PCDHA8Q9Y5H6 950 aa7.37□□□□□ -1.23
CHD8-207ENST00000554384 FAM83GA6ND36 823 aa7.36□□□□□ -1.23
CHD8-207ENST00000554384 PPP1R11O60927 126 aaPredicted RBP7.36□□□□□ -1.23
CHD8-207ENST00000554384 KIR3DS1Q14943 382 aa7.36□□□□□ -1.23
CHD8-207ENST00000554384 PTPROQ16827 1216 aa7.36□□□□□ -1.23
CHD8-207ENST00000554384 STYK1Q6J9G0 422 aa7.36□□□□□ -1.23
CHD8-207ENST00000554384 DIO2Q92813 273 aa7.36□□□□□ -1.23
CHD8-207ENST00000554384 TARS2Q9BW92 718 aaKnown RBP7.36□□□□□ -1.23
CHD8-207ENST00000554384 PLAAQ9Y263 795 aa7.36□□□□□ -1.23
CHD8-207ENST00000554384 PCDHA2Q9Y5H9 948 aa7.36□□□□□ -1.23
CHD8-207ENST00000554384 NPFFR2Q9Y5X5 522 aa7.36□□□□□ -1.23
CHD8-207ENST00000554384 KCNQ2O43526 872 aa7.35□□□□□ -1.23
CHD8-207ENST00000554384 LTBRP36941 435 aa7.35□□□□□ -1.23
CHD8-207ENST00000554384 ACBD5Q5T8D3 534 aaPredicted RBP7.35□□□□□ -1.23
CHD8-207ENST00000554384 INTS5Q6P9B9 1019 aaKnown RBP7.35□□□□□ -1.23
CHD8-207ENST00000554384 DPF3Q92784 378 aa7.35□□□□□ -1.23
CHD8-207ENST00000554384 HHIPL1Q96JK4 782 aa7.35□□□□□ -1.23
CHD8-207ENST00000554384 PUS7Q96PZ0 661 aaKnown RBP7.35□□□□□ -1.23
CHD8-207ENST00000554384 KRTAP4-9Q9BYQ8 210 aa7.35□□□□□ -1.23
CHD8-207ENST00000554384 BTG4Q9NY30 223 aa7.35□□□□□ -1.23
CHD8-207ENST00000554384 TCRBV16S1A1N1A0A5B0 115 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 C7orf72A4D263 438 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 USP2O75604 605 aaPredicted RBP7.34□□□□□ -1.23
CHD8-207ENST00000554384 EFEMP2O95967 443 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 HK2P52789 917 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 AMPD3Q01432 767 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 GUCY1A3Q02108 690 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 ABHD17CQ6PCB6 329 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 LRRTM3Q86VH5 581 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 DTX1Q86Y01 620 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 THNSL2Q86YJ6 484 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 MISP3Q96FF7 219 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 MAGEB10Q96LZ2 347 aaPredicted RBP7.34□□□□□ -1.23
CHD8-207ENST00000554384 JMJD8Q96S16 334 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 MMP19Q99542 508 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 PAK6Q9NQU5 681 aaPredicted RBP7.34□□□□□ -1.23
CHD8-207ENST00000554384 COL4A3BPQ9Y5P4 624 aa7.34□□□□□ -1.23
CHD8-207ENST00000554384 FADS2P1A8MWK0 482 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 PPM1GO15355 546 aaPredicted RBP7.33□□□□□ -1.24
CHD8-207ENST00000554384 PDE8AO60658 829 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 PRNPP04156 253 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 ZGLP1P0C6A0 271 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 SRGAP2CP0DJJ0 459 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 KCNA6P17658 529 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 NCLP19338 710 aaKnown RBP7.33□□□□□ -1.24
CHD8-207ENST00000554384 BCL6P41182 706 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 TXKP42681 527 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 ERVFC1P60507 584 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 GPR85P60893 370 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 PCBP1Q15365 356 aaKnown RBP eCLIP7.33□□□□□ -1.24
CHD8-207ENST00000554384 TESK1Q15569 626 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 ANGEL2Q5VTE6 544 aaKnown RBP7.33□□□□□ -1.24
CHD8-207ENST00000554384 E4F1Q66K89 784 aaPredicted RBP7.33□□□□□ -1.24
CHD8-207ENST00000554384 LBX2Q6XYB7 198 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 MAMDC2Q7Z304 686 aaPredicted RBP7.33□□□□□ -1.24
CHD8-207ENST00000554384 FLCNQ8NFG4 579 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 LINC01599Q8WXQ3 324 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 MAP6Q96JE9 813 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 FCRL2Q96LA5 508 aaPredicted RBP7.33□□□□□ -1.24
CHD8-207ENST00000554384 GPR27Q9NS67 375 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 LMCD1Q9NZU5 365 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 GULP1Q9UBP9 304 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 ADAMTS6Q9UKP5 1117 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 PRKAB1Q9Y478 270 aa7.33□□□□□ -1.24
CHD8-207ENST00000554384 NOTOA8MTQ0 251 aa7.32□□□□□ -1.24
CHD8-207ENST00000554384 GSG1L2A8MUP6 293 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms