RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 KDM4AO75164 1064 aa22■■□□□ 1.11
CPSF2-203ENST00000554290 ITGA7Q13683 1181 aa22■■□□□ 1.11
CPSF2-203ENST00000554290 DUSP28Q4G0W2 176 aa22■■□□□ 1.11
CPSF2-203ENST00000554290 CLEC4DQ8WXI8 215 aa22■■□□□ 1.11
CPSF2-203ENST00000554290 CDX2Q99626 313 aaPredicted RBP22■■□□□ 1.11
CPSF2-203ENST00000554290 DSCC1Q9BVC3 393 aa22■■□□□ 1.11
CPSF2-203ENST00000554290 KAT14Q9H8E8 782 aa22■■□□□ 1.11
CPSF2-203ENST00000554290 CTNNA3Q9UI47 895 aa22■■□□□ 1.11
CPSF2-203ENST00000554290 COL6A3P12111 3177 aa22■■□□□ 1.11
CPSF2-203ENST00000554290 B4DLN1 442 aa21.99■■□□□ 1.11
CPSF2-203ENST00000554290 CD4P01730 458 aa21.99■■□□□ 1.11
CPSF2-203ENST00000554290 MRPL12P52815 198 aaKnown RBP21.99■■□□□ 1.11
CPSF2-203ENST00000554290 IMMTQ16891 758 aaKnown RBP21.99■■□□□ 1.11
CPSF2-203ENST00000554290 PNMA1Q8ND90 353 aa21.99■■□□□ 1.11
CPSF2-203ENST00000554290 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.99■■□□□ 1.11
CPSF2-203ENST00000554290 WDR11Q9BZH6 1224 aa21.99■■□□□ 1.11
CPSF2-203ENST00000554290 PPP1R12CQ9BZL4 782 aa21.99■■□□□ 1.11
CPSF2-203ENST00000554290 GOLGA8HP0CJ92 632 aa21.98■■□□□ 1.11
CPSF2-203ENST00000554290 CSF2RAP15509 400 aa21.98■■□□□ 1.11
CPSF2-203ENST00000554290 PDE4DQ08499 809 aa21.98■■□□□ 1.11
CPSF2-203ENST00000554290 SLC30A10Q6XR72 485 aa21.98■■□□□ 1.11
CPSF2-203ENST00000554290 DNERQ8NFT8 737 aa21.98■■□□□ 1.11
CPSF2-203ENST00000554290 ZSCAN10Q96SZ4 725 aaPredicted RBP21.98■■□□□ 1.11
CPSF2-203ENST00000554290 RPS6P62753 249 aaKnown RBP21.97■■□□□ 1.11
CPSF2-203ENST00000554290 TMEM63BQ5T3F8 832 aa21.97■■□□□ 1.11
CPSF2-203ENST00000554290 RGS22Q8NE09 1264 aa21.97■■□□□ 1.11
CPSF2-203ENST00000554290 ANKS1AQ92625 1134 aa21.97■■□□□ 1.11
CPSF2-203ENST00000554290 KRT23Q9C075 422 aa21.97■■□□□ 1.11
CPSF2-203ENST00000554290 UBA5Q9GZZ9 404 aa21.97■■□□□ 1.11
CPSF2-203ENST00000554290 TTYH1Q9H313 450 aaPredicted RBP21.97■■□□□ 1.11
CPSF2-203ENST00000554290 POLR3EQ9NVU0 708 aa21.97■■□□□ 1.11
CPSF2-203ENST00000554290 LAMA2P24043 3122 aaKnown RBP21.96■■□□□ 1.11
CPSF2-203ENST00000554290 RBM47A0AV96 593 aaKnown RBP21.96■■□□□ 1.11
CPSF2-203ENST00000554290 B4E1Z4 1266 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 PTGS1P23219 599 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 CYP2C18P33260 490 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 CPT1AP50416 773 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 USH1GQ495M9 461 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 BRDTQ58F21 947 aaPredicted RBP21.96■■□□□ 1.11
CPSF2-203ENST00000554290 TMEM240Q5SV17 173 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 PSRC1Q6PGN9 363 aaPredicted RBP21.96■■□□□ 1.11
CPSF2-203ENST00000554290 C16orf59Q7L2K0 433 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 MAF1Q9H063 256 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 HIPK3Q9H422 1215 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 CNNM2Q9H8M5 875 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 ZSWIM5Q9P217 1185 aa21.96■■□□□ 1.11
CPSF2-203ENST00000554290 LRRC37A2A6NM11 1700 aa21.95■■□□□ 1.1
CPSF2-203ENST00000554290 ASPRV1Q53RT3 343 aa21.95■■□□□ 1.1
CPSF2-203ENST00000554290 GPHNQ9NQX3 736 aaPredicted RBP21.95■■□□□ 1.1
CPSF2-203ENST00000554290 GRIN2DO15399 1336 aa21.95■■□□□ 1.1
CPSF2-203ENST00000554290 NKRFO15226 690 aaKnown RBP eCLIP21.94■■□□□ 1.1
CPSF2-203ENST00000554290 EDNRBP24530 442 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 DNAJB2P25686 324 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 PSMC6P62333 389 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 PPP2R5BQ15173 497 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 ZNF365Q70YC5 407 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 ENAHQ8N8S7 591 aaPredicted RBP21.94■■□□□ 1.1
CPSF2-203ENST00000554290 OR6J1Q8NGC5 347 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 SCFD2Q8WU76 684 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 MYLIPQ8WY64 445 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 UBAC1Q9BSL1 405 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 TRPV6Q9H1D0 765 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 CPVLQ9H3G5 476 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 IL23AQ9NPF7 189 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 RAD50Q92878 1312 aa21.94■■□□□ 1.1
CPSF2-203ENST00000554290 B4GALT4O60513 344 aa21.93■■□□□ 1.1
CPSF2-203ENST00000554290 TNKSO95271 1327 aa21.93■■□□□ 1.1
CPSF2-203ENST00000554290 ABCB11O95342 1321 aa21.93■■□□□ 1.1
CPSF2-203ENST00000554290 ACRP10323 421 aa21.93■■□□□ 1.1
CPSF2-203ENST00000554290 CDC37Q16543 378 aaPredicted RBP21.93■■□□□ 1.1
CPSF2-203ENST00000554290 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.93■■□□□ 1.1
CPSF2-203ENST00000554290 ADGRF4Q8IZF3 695 aa21.93■■□□□ 1.1
CPSF2-203ENST00000554290 MAFAQ8NHW3 353 aaPredicted RBP21.93■■□□□ 1.1
CPSF2-203ENST00000554290 MTIF3Q9H2K0 278 aaKnown RBP21.93■■□□□ 1.1
CPSF2-203ENST00000554290 DHX16O60231 1041 aaKnown RBP21.92■■□□□ 1.1
CPSF2-203ENST00000554290 FGBP02675 491 aa21.92■■□□□ 1.1
CPSF2-203ENST00000554290 MYL3P08590 195 aa21.92■■□□□ 1.1
CPSF2-203ENST00000554290 PARP1P09874 1014 aaKnown RBP21.92■■□□□ 1.1
CPSF2-203ENST00000554290 SUPT20HL2P0C7V6 817 aa21.92■■□□□ 1.1
CPSF2-203ENST00000554290 RASIP1Q5U651 963 aa21.92■■□□□ 1.1
CPSF2-203ENST00000554290 MCF2L2Q86YR7 1114 aa21.92■■□□□ 1.1
CPSF2-203ENST00000554290 MTG1Q9BT17 334 aaPredicted RBP21.92■■□□□ 1.1
CPSF2-203ENST00000554290 NOC4LQ9BVI4 516 aaKnown RBP21.92■■□□□ 1.1
CPSF2-203ENST00000554290 LCTP09848 1927 aa21.92■■□□□ 1.1
CPSF2-203ENST00000554290 KPNA6O60684 536 aa21.91■■□□□ 1.1
CPSF2-203ENST00000554290 TXNP10599 105 aaKnown RBP21.91■■□□□ 1.1
CPSF2-203ENST00000554290 FOSL2P15408 326 aa21.91■■□□□ 1.1
CPSF2-203ENST00000554290 PURAQ00577 322 aaKnown RBP21.91■■□□□ 1.1
CPSF2-203ENST00000554290 TIFAQ96CG3 184 aa21.91■■□□□ 1.1
CPSF2-203ENST00000554290 ALDH8A1Q9H2A2 487 aaPredicted RBP21.91■■□□□ 1.1
CPSF2-203ENST00000554290 SUPT16HQ9Y5B9 1047 aaKnown RBP21.91■■□□□ 1.1
CPSF2-203ENST00000554290 CCL23P55773 120 aa21.9■■□□□ 1.1
CPSF2-203ENST00000554290 TTLL4Q14679 1199 aa21.9■■□□□ 1.1
CPSF2-203ENST00000554290 IFIT1BQ5T764 474 aaKnown RBP21.9■■□□□ 1.1
CPSF2-203ENST00000554290 FBXO11Q86XK2 927 aa21.9■■□□□ 1.1
CPSF2-203ENST00000554290 RPUSD2Q8IZ73 545 aaKnown RBP21.9■■□□□ 1.1
CPSF2-203ENST00000554290 HERVK_113Q902F9 699 aa21.9■■□□□ 1.1
CPSF2-203ENST00000554290 ZNF576Q9H609 170 aa21.9■■□□□ 1.1
CPSF2-203ENST00000554290 VAT1LQ9HCJ6 419 aa21.9■■□□□ 1.1
CPSF2-203ENST00000554290 MRPL11Q9Y3B7 192 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms