RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 LPIN2Q92539 896 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 EDC3Q96F86 508 aaKnown RBP8.54□□□□□ -1.04
ATXN3-224ENST00000554040 UHRF1Q96T88 793 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-224ENST00000554040 APBA2Q99767 749 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 SRCIN1Q9C0H9 1055 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 BICC1Q9H694 974 aaKnown RBP8.54□□□□□ -1.04
ATXN3-224ENST00000554040 PRDM5Q9NQX1 630 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-224ENST00000554040 DDX20Q9UHI6 824 aaKnown RBP8.54□□□□□ -1.04
ATXN3-224ENST00000554040 GAKO14976 1311 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 SYNGAP1Q96PV0 1343 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 SALL1Q9NSC2 1324 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 A0A1B0GUL6 1792 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 TRIM43BA6NCK2 446 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 CAP2P40123 477 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 BACE1P56817 501 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 PCBP4P57723 403 aaKnown RBP8.53□□□□□ -1.04
ATXN3-224ENST00000554040 HERVK_113P62684 666 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 ERVK-24P63145 666 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 MRPS5P82675 430 aaKnown RBP8.53□□□□□ -1.04
ATXN3-224ENST00000554040 PICALMQ13492 652 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 CCDC27Q2M243 656 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 WWC1Q8IX03 1113 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 CCAR1Q8IX12 1150 aaKnown RBP8.53□□□□□ -1.04
ATXN3-224ENST00000554040 ANKRD44Q8N8A2 993 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 KLHDC4Q8TBB5 520 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 GTF3C2Q8WUA4 911 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-224ENST00000554040 TRIM43Q96BQ3 446 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-224ENST00000554040 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 C1QTNF1Q9BXJ1 281 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 PORCNQ9H237 461 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 AS3MTQ9HBK9 375 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 GNL3LQ9NVN8 582 aaKnown RBP8.53□□□□□ -1.04
ATXN3-224ENST00000554040 UTYO14607 1347 aa8.53□□□□□ -1.04
ATXN3-224ENST00000554040 RFX7Q2KHR2 1363 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-224ENST00000554040 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-224ENST00000554040 FAM196BA6NMK8 535 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 CNGA1P29973 690 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 LAMC2Q13753 1193 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 RRP1BQ14684 758 aaKnown RBP8.52□□□□□ -1.05
ATXN3-224ENST00000554040 SNX17Q15036 470 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 TRIM60Q495X7 471 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 AKNAD1Q5T1N1 836 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 GJC2Q5T442 439 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-224ENST00000554040 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 SLC4A10Q6U841 1118 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 ARRDC4Q8NCT1 418 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 PPM1EQ8WY54 764 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 RNPC3Q96LT9 517 aaKnown RBP8.52□□□□□ -1.05
ATXN3-224ENST00000554040 ZNF576Q9H609 170 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 PDLIM7Q9NR12 457 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 TMOD4Q9NZQ9 345 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 FLRT1Q9NZU1 646 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 MARK1Q9P0L2 795 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 THEGQ9P2T0 379 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 DENND2AQ9ULE3 1009 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 IL16Q14005 1332 aa8.52□□□□□ -1.05
ATXN3-224ENST00000554040 C19orf81C9J6K1 198 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 EYA2O00167 538 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 GLRX3O76003 335 aaKnown RBP8.51□□□□□ -1.05
ATXN3-224ENST00000554040 DKK1O94907 266 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 BTDP43251 543 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 EPHB4P54760 987 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 RHBDL3P58872 404 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 ATP2B2Q01814 1243 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 C1orf53Q5VUE5 145 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 LRRC69Q6ZNQ3 347 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 ZGPATQ8N5A5 531 aaKnown RBP8.51□□□□□ -1.05
ATXN3-224ENST00000554040 TRPV1Q8NER1 839 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 TPCN2Q8NHX9 752 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 TIFAQ96CG3 184 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 MUC6Q6W4X9 2439 aa8.51□□□□□ -1.05
ATXN3-224ENST00000554040 PTPRFP10586 1907 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 PLXNB2O15031 1838 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 GPR75-ASB3A0A0A6YYF3 556 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 SLC15A5A6NIM6 579 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 C1QTNF9BB2RNN3 333 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 KBTBD13C9JR72 458 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 IGHA2P01877 340 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 HOXC6P09630 235 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 ITGB8P26012 769 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 TLE2Q04725 743 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 CD163Q86VB7 1156 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 DZIP1Q86YF9 867 aaKnown RBP8.5□□□□□ -1.05
ATXN3-224ENST00000554040 TRIM11Q96F44 468 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 PAGR1Q9BTK6 254 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 TSPAN10Q9H1Z9 355 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-224ENST00000554040 CWC22Q9HCG8 908 aaKnown RBP8.5□□□□□ -1.05
ATXN3-224ENST00000554040 TACC3Q9Y6A5 838 aa8.5□□□□□ -1.05
ATXN3-224ENST00000554040 XIRP2A4UGR9 3374 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 USP17L10C9JJH3 530 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 MAP4K4O95819 1239 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-224ENST00000554040 CYP2C19P33261 490 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 CHRNA4P43681 627 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 PHKA1P46020 1223 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 RFX5P48382 616 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-224ENST00000554040 CCNA1P78396 465 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 EXOSC9Q06265 439 aaKnown RBP8.49□□□□□ -1.05
ATXN3-224ENST00000554040 CCDC102BQ68D86 513 aa8.49□□□□□ -1.05
ATXN3-224ENST00000554040 ATG9AQ7Z3C6 839 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms