RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 PLEKHA8P1O95397 391 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 SNAI1O95863 264 aaPredicted RBP10.8□□□□□ -0.68
CHD8-206ENST00000553870 MYCP01106 439 aaPredicted RBP10.8□□□□□ -0.68
CHD8-206ENST00000553870 CPA1P15085 419 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 RXRAP19793 462 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 PDIA3P30101 505 aaKnown RBP10.8□□□□□ -0.68
CHD8-206ENST00000553870 METAP2P50579 478 aaKnown RBP eCLIP10.8□□□□□ -0.68
CHD8-206ENST00000553870 SOX10P56693 466 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 CNTN2Q02246 1040 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 APOBRQ0VD83 1088 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 HOMER1Q86YM7 354 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 FGD4Q96M96 766 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 UPF2Q9HAU5 1272 aaKnown RBP10.8□□□□□ -0.68
CHD8-206ENST00000553870 FAM217BQ9NTX9 383 aaPredicted RBP10.8□□□□□ -0.68
CHD8-206ENST00000553870 DDX20Q9UHI6 824 aaKnown RBP10.8□□□□□ -0.68
CHD8-206ENST00000553870 OGDHLQ9ULD0 1010 aa10.8□□□□□ -0.68
CHD8-206ENST00000553870 hCG_1984214I3L0E3 225 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 PPP1R11O60927 126 aaPredicted RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 TFRCP02786 760 aaKnown RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 EN2P19622 333 aaPredicted RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 CALML3P27482 149 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 CNGA1P29973 690 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 CCND3P30281 292 aaPredicted RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 HSD17B4P51659 736 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 FUT2Q10981 343 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 ACVR2BQ13705 512 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 TOB2Q14106 344 aaPredicted RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 LHX8Q68G74 356 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 ARMCX2Q7L311 632 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 CCDC144CPQ8IYA2 1237 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 ZNF713Q8N859 430 aaPredicted RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 SYTL5Q8TDW5 730 aaPredicted RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 NSUN6Q8TEA1 469 aaKnown RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 IWS1Q96ST2 819 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 UPF3BQ9BZI7 483 aaKnown RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 FAM184BQ9ULE4 1060 aa10.79□□□□□ -0.68
CHD8-206ENST00000553870 NAP1L2Q9ULW6 460 aaPredicted RBP10.79□□□□□ -0.68
CHD8-206ENST00000553870 GCOM1H8Y6P7 765 aaPredicted RBP10.78□□□□□ -0.68
CHD8-206ENST00000553870 PRPF3O43395 683 aaKnown RBP10.78□□□□□ -0.68
CHD8-206ENST00000553870 POLR2MP0CAP2 368 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 ZNF865P0CJ78 1059 aaPredicted RBP10.78□□□□□ -0.68
CHD8-206ENST00000553870 AKR1A1P14550 325 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 CDC27P30260 824 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 ADD1P35611 737 aaKnown RBP10.78□□□□□ -0.68
CHD8-206ENST00000553870 RBM25P49756 843 aaKnown RBP10.78□□□□□ -0.68
CHD8-206ENST00000553870 ALDH5A1P51649 535 aaPredicted RBP10.78□□□□□ -0.68
CHD8-206ENST00000553870 PRAMEF19Q5SWL8 479 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 CPLX2Q6PUV4 134 aaKnown RBP10.78□□□□□ -0.68
CHD8-206ENST00000553870 ARRDC4Q8NCT1 418 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 TRPV1Q8NER1 839 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 TBC1D5Q92609 795 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 CUL5Q93034 780 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 C22orf23Q9BZE7 217 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 GLT8D2Q9H1C3 349 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 VTA1Q9NP79 307 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
CHD8-206ENST00000553870 HTTP42858 3142 aa10.78□□□□□ -0.68
CHD8-206ENST00000553870 RBBP6Q7Z6E9 1792 aaKnown RBP10.77□□□□□ -0.68
CHD8-206ENST00000553870 SMCHD1A6NHR9 2005 aa10.77□□□□□ -0.68
CHD8-206ENST00000553870 PIK3CDO00329 1044 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 OPLAHO14841 1288 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 CFBP00751 764 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 RARBP10826 455 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 IFNAR1P17181 557 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 TAL1P17542 331 aaPredicted RBP10.77□□□□□ -0.69
CHD8-206ENST00000553870 EDNRBP24530 442 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 NEK4P51957 841 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 AKAP17AQ02040 695 aaKnown RBP10.77□□□□□ -0.69
CHD8-206ENST00000553870 NTRK3Q16288 839 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 IQSEC1Q6DN90 963 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 PPP1R18Q6NYC8 613 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 SLC30A10Q6XR72 485 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 RAB11FIP4Q86YS3 637 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 CMTR1Q8N1G2 835 aaKnown RBP10.77□□□□□ -0.69
CHD8-206ENST00000553870 CCDC82Q8N4S0 544 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 RMDN3Q96TC7 470 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 RNF26Q9BY78 433 aaPredicted RBP10.77□□□□□ -0.69
CHD8-206ENST00000553870 KATNBL1Q9H079 304 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 PSTPIP2Q9H939 334 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 BAZ2BQ9UIF8 2168 aaKnown RBP10.77□□□□□ -0.69
CHD8-206ENST00000553870 CNTNAP5Q8WYK1 1306 aa10.77□□□□□ -0.69
CHD8-206ENST00000553870 PLXNA1Q9UIW2 1896 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 CPLX1O14810 134 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 DUSP11O75319 330 aaKnown RBP10.76□□□□□ -0.69
CHD8-206ENST00000553870 MLLT1Q03111 559 aaPredicted RBP10.76□□□□□ -0.69
CHD8-206ENST00000553870 PDE4DQ08499 809 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 STXBP2Q15833 593 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 PFKFB3Q16875 520 aaPredicted RBP10.76□□□□□ -0.69
CHD8-206ENST00000553870 ARHGEF16Q5VV41 709 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 UBE2Q1Q7Z7E8 422 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 FAM177A1Q8N128 213 aaPredicted RBP10.76□□□□□ -0.69
CHD8-206ENST00000553870 CCDC12Q8WUD4 166 aaPredicted RBP10.76□□□□□ -0.69
CHD8-206ENST00000553870 PIBF1Q8WXW3 757 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 SHISA4Q96DD7 197 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 TAAR1Q96RJ0 339 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 SLKQ9H2G2 1235 aaPredicted RBP10.76□□□□□ -0.69
CHD8-206ENST00000553870 ZHX1Q9UKY1 873 aaPredicted RBP10.76□□□□□ -0.69
CHD8-206ENST00000553870 Q9Y3F1 56 aa10.76□□□□□ -0.69
CHD8-206ENST00000553870 ASTN1O14525 1302 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms