RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ELNP15502 786 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 CAPN2P17655 700 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 MCM5P33992 734 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 NOVP48745 357 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 SOX10P56693 466 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 FGD1P98174 961 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 MLLT1Q03111 559 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-209ENST00000553855 TKFCQ3LXA3 575 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 TMEM67Q5HYA8 995 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 SYDE2Q5VT97 1194 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 CREB3L3Q68CJ9 461 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 SYNE3Q6ZMZ3 975 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 CATIPQ7Z7H3 387 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 ABRAQ8N0Z2 381 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 TMTC2Q8N394 836 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 KCTD17Q8N5Z5 321 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 CHST13Q8NET6 341 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 ZNF333Q96JL9 665 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 RNF208Q9H0X6 261 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 SLC38A10Q9HBR0 1119 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 RAVER2Q9HCJ3 691 aaKnown RBP9.73□□□□□ -0.85
PSEN1-209ENST00000553855 HMX1Q9NP08 348 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-209ENST00000553855 ADAMTS5Q9UNA0 930 aa9.73□□□□□ -0.85
PSEN1-209ENST00000553855 FRMPD2Q68DX3 1309 aaPredicted RBP9.73□□□□□ -0.85
PSEN1-209ENST00000553855 CCDC69A6NI79 296 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 ATP2A1O14983 1001 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 HRO43593 1189 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 INHAP05111 366 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 HMGB1P09429 215 aaKnown RBP9.72□□□□□ -0.85
PSEN1-209ENST00000553855 PDHBP11177 359 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 ADORA2AP29274 412 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 CAP1Q01518 475 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 ZNF543Q08ER8 600 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 GRB14Q14449 540 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 ASPRV1Q53RT3 343 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 MORN1Q5T089 497 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 ANKRD35Q8N283 1001 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 ENAHQ8N8S7 591 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-209ENST00000553855 ANKS1AQ92625 1134 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-209ENST00000553855 TMEM87BQ96K49 555 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 MTA3Q9BTC8 594 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 GJD2Q9UKL4 321 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 PRR12Q9ULL5 1215 aa9.72□□□□□ -0.85
PSEN1-209ENST00000553855 PRC1O43663 620 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 ALAS1P13196 640 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 CCL5P13501 91 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 PSMA5P28066 241 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 SLC16A2P36021 539 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 TRAF1Q13077 416 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 NECTIN1Q15223 517 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 CYB5R4Q7L1T6 521 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 CTCFLQ8NI51 663 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-209ENST00000553855 NEK1Q96PY6 1258 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 ACAD9Q9H845 621 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-209ENST00000553855 ZNF214Q9UL59 606 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-209ENST00000553855 CCPG1Q9ULG6 757 aa9.71□□□□□ -0.86
PSEN1-209ENST00000553855 GREB1LQ9C091 1923 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-209ENST00000553855 EPB41L2O43491 1005 aaKnown RBP9.7□□□□□ -0.86
PSEN1-209ENST00000553855 TFRCP02786 760 aaKnown RBP9.7□□□□□ -0.86
PSEN1-209ENST00000553855 GJB1P08034 283 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 HOXC6P09630 235 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 GOLGA8HP0CJ92 632 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 CALM1P0DP23 149 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 CALM2P0DP24 149 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 CALM3P0DP25 149 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 CNGA1P29973 690 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 KIF5BP33176 963 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 TTBK2Q6IQ55 1244 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 BTNL9Q6UXG8 535 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 MB21D2Q8IYB1 491 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-209ENST00000553855 REPS2Q8NFH8 660 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 NUP133Q8WUM0 1156 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 MPHOSPH6Q99547 160 aaKnown RBP9.7□□□□□ -0.86
PSEN1-209ENST00000553855 HOMER2Q9NSB8 354 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 RNF146Q9NTX7 359 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 RPTORQ8N122 1335 aa9.7□□□□□ -0.86
PSEN1-209ENST00000553855 PFASO15067 1338 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 GPR37L1O60883 481 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 ICAM1P05362 532 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 SNHG28P0DPA3 235 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 GNAQP50148 359 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 MTFR1Q15390 333 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 SEC23AQ15436 765 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 LAMA4Q16363 1823 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 OLFML2BQ68BL8 750 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 STOX1Q6ZVD7 989 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 CHST3Q7LGC8 479 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 TRIB2Q92519 343 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 TSC1Q92574 1164 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 USP6NLQ92738 828 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 AGBL1Q96MI9 1066 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 UBA5Q9GZZ9 404 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.69□□□□□ -0.86
PSEN1-209ENST00000553855 UNC93B1Q9H1C4 597 aa9.69□□□□□ -0.86
PSEN1-209ENST00000553855 RANBP17Q9H2T7 1088 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms