RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
PRKCH-207ENST00000553831 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
PRKCH-207ENST00000553831 KCNB2Q92953 911 aa16.52■□□□□ 0.24
PRKCH-207ENST00000553831 TCEANC2Q96MN5 208 aa16.52■□□□□ 0.24
PRKCH-207ENST00000553831 BAZ2BQ9UIF8 2168 aaKnown RBP16.52■□□□□ 0.24
PRKCH-207ENST00000553831 LOC102724159A0A0B4J2E5 919 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 MYADML2A6NDP7 307 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 OPLAHO14841 1288 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 REC8O95072 547 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 KIF5BP33176 963 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 HSPA4P34932 840 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 ADCYAP1R1P41586 468 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 IRX5P78411 483 aaPredicted RBP16.51■□□□□ 0.23
PRKCH-207ENST00000553831 PWP2Q15269 919 aaKnown RBP16.51■□□□□ 0.23
PRKCH-207ENST00000553831 DHX32Q7L7V1 743 aaKnown RBP16.51■□□□□ 0.23
PRKCH-207ENST00000553831 SGMS1Q86VZ5 419 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 MCF2L2Q86YR7 1114 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 DNERQ8NFT8 737 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 SYTL5Q8TDW5 730 aaPredicted RBP16.51■□□□□ 0.23
PRKCH-207ENST00000553831 PIBF1Q8WXW3 757 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 FERMT2Q96AC1 680 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 SPZ1Q9BXG8 430 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 VTA1Q9NP79 307 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 PDGFCQ9NRA1 345 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 COL20A1Q9P218 1284 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 PHF24Q9UPV7 400 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 SLC12A7Q9Y666 1083 aa16.51■□□□□ 0.23
PRKCH-207ENST00000553831 RANBP2P49792 3224 aaKnown RBP16.5■□□□□ 0.23
PRKCH-207ENST00000553831 PLEKHA8P1O95397 391 aa16.5■□□□□ 0.23
PRKCH-207ENST00000553831 EDNRBP24530 442 aa16.5■□□□□ 0.23
PRKCH-207ENST00000553831 EXOSC10Q01780 885 aaKnown RBP16.5■□□□□ 0.23
PRKCH-207ENST00000553831 TNFAIP2Q03169 654 aa16.5■□□□□ 0.23
PRKCH-207ENST00000553831 TAPT1Q6NXT6 567 aa16.5■□□□□ 0.23
PRKCH-207ENST00000553831 MICU3Q86XE3 530 aa16.5■□□□□ 0.23
PRKCH-207ENST00000553831 KLHDC9Q8NEP7 349 aa16.5■□□□□ 0.23
PRKCH-207ENST00000553831 MAF1Q9H063 256 aa16.5■□□□□ 0.23
PRKCH-207ENST00000553831 UPF3AQ9H1J1 476 aaKnown RBP16.5■□□□□ 0.23
PRKCH-207ENST00000553831 ZMYND8Q9ULU4 1186 aaPredicted RBP16.5■□□□□ 0.23
PRKCH-207ENST00000553831 PCDHA1Q9Y5I3 950 aa16.5■□□□□ 0.23
PRKCH-207ENST00000553831 SNX14Q9Y5W7 946 aa16.5■□□□□ 0.23
PRKCH-207ENST00000553831 PNMA6FA0A0J9YX94 578 aa16.49■□□□□ 0.23
PRKCH-207ENST00000553831 CFBP00751 764 aa16.49■□□□□ 0.23
PRKCH-207ENST00000553831 C6orf222P0C671 652 aaPredicted RBP16.49■□□□□ 0.23
PRKCH-207ENST00000553831 CALM1P0DP23 149 aa16.49■□□□□ 0.23
PRKCH-207ENST00000553831 CALM2P0DP24 149 aa16.49■□□□□ 0.23
PRKCH-207ENST00000553831 CALM3P0DP25 149 aa16.49■□□□□ 0.23
PRKCH-207ENST00000553831 PTGS1P23219 599 aa16.49■□□□□ 0.23
PRKCH-207ENST00000553831 GJA9P57773 515 aa16.49■□□□□ 0.23
PRKCH-207ENST00000553831 RTP1P59025 263 aa16.49■□□□□ 0.23
PRKCH-207ENST00000553831 PDE4DQ08499 809 aa16.49■□□□□ 0.23
PRKCH-207ENST00000553831 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
PRKCH-207ENST00000553831 SRBD1Q8N5C6 995 aaKnown RBP16.49■□□□□ 0.23
PRKCH-207ENST00000553831 JAKMIP1Q96N16 626 aaKnown RBP16.49■□□□□ 0.23
PRKCH-207ENST00000553831 GNEQ9Y223 722 aaKnown RBP16.49■□□□□ 0.23
PRKCH-207ENST00000553831 A0A1W2PQ45 241 aaPredicted RBP16.48■□□□□ 0.23
PRKCH-207ENST00000553831 A0A1W2PQY0 241 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 HMGB1P09429 215 aaKnown RBP16.48■□□□□ 0.23
PRKCH-207ENST00000553831 CPA1P15085 419 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 SMPD1P17405 629 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 CST5P28325 142 aaPredicted RBP16.48■□□□□ 0.23
PRKCH-207ENST00000553831 GNAQP50148 359 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 HSD17B4P51659 736 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 GHRHRQ02643 423 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 TMEM63BQ5T3F8 832 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 CCSAPQ6IQ19 270 aaPredicted RBP16.48■□□□□ 0.23
PRKCH-207ENST00000553831 APOA5Q6Q788 366 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 CHRDL2Q6WN34 429 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 SLC39A5Q6ZMH5 540 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 TLK2Q86UE8 772 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 CMTR1Q8N1G2 835 aaKnown RBP16.48■□□□□ 0.23
PRKCH-207ENST00000553831 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 MPHOSPH6Q99547 160 aaKnown RBP16.48■□□□□ 0.23
PRKCH-207ENST00000553831 LZTS2Q9BRK4 669 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 TSEN34Q9BSV6 310 aaKnown RBP16.48■□□□□ 0.23
PRKCH-207ENST00000553831 SPC25Q9HBM1 224 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 PCDH10Q9P2E7 1040 aa16.48■□□□□ 0.23
PRKCH-207ENST00000553831 CTAGE5O15320 804 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 SYN1P17600 705 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 SMARCA1P28370 1054 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 TRAF1Q13077 416 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 SNX17Q15036 470 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 KCNA10Q16322 511 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 IQSEC1Q6DN90 963 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 SYNE3Q6ZMZ3 975 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 TMTC3Q6ZXV5 915 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 FANCBQ8NB91 859 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 RRP36Q96EU6 259 aaKnown RBP16.47■□□□□ 0.23
PRKCH-207ENST00000553831 RMDN3Q96TC7 470 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 COLQQ9Y215 455 aaPredicted RBP16.47■□□□□ 0.23
PRKCH-207ENST00000553831 ATP11BQ9Y2G3 1177 aa16.47■□□□□ 0.23
PRKCH-207ENST00000553831 RBM47A0AV96 593 aaKnown RBP16.46■□□□□ 0.23
PRKCH-207ENST00000553831 MOXD2PA6NHM9 499 aa16.46■□□□□ 0.23
PRKCH-207ENST00000553831 B4DLN1 442 aa16.46■□□□□ 0.23
PRKCH-207ENST00000553831 EPB41L2O43491 1005 aaKnown RBP16.46■□□□□ 0.23
PRKCH-207ENST00000553831 HOXA13P31271 388 aaPredicted RBP16.46■□□□□ 0.23
PRKCH-207ENST00000553831 MRPL12P52815 198 aaKnown RBP16.46■□□□□ 0.23
PRKCH-207ENST00000553831 ACLYP53396 1101 aa16.46■□□□□ 0.23
PRKCH-207ENST00000553831 NKX3-2P78367 333 aa16.46■□□□□ 0.23
PRKCH-207ENST00000553831 BEX3Q00994 111 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms