RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 GPKOWQ92917 476 aaPredicted RBP eCLIP16.47■□□□□ 0.23
SV2B-204ENST00000553727 SLC26A6Q9BXS9 759 aa16.47■□□□□ 0.23
SV2B-204ENST00000553727 ADD3Q9UEY8 706 aaKnown RBP16.47■□□□□ 0.23
SV2B-204ENST00000553727 RPTORQ8N122 1335 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 GCOM1H8Y6P7 765 aaPredicted RBP16.46■□□□□ 0.23
SV2B-204ENST00000553727 OPLAHO14841 1288 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 PFKFB2O60825 505 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 POLR2MP0CAP2 368 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 IFNAR1P17181 557 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 CCND3P30281 292 aaPredicted RBP16.46■□□□□ 0.23
SV2B-204ENST00000553727 SCRN1Q12765 414 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 NTRK3Q16288 839 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 ME3Q16798 604 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
SV2B-204ENST00000553727 MSL3Q8N5Y2 521 aaKnown RBP16.46■□□□□ 0.23
SV2B-204ENST00000553727 NECAB1Q8N987 351 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 SYTL5Q8TDW5 730 aaPredicted RBP16.46■□□□□ 0.23
SV2B-204ENST00000553727 FGD4Q96M96 766 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 ZNF236Q9UL36 1845 aa16.46■□□□□ 0.23
SV2B-204ENST00000553727 ASB14A6NK59 587 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 PRPF3O43395 683 aaKnown RBP16.45■□□□□ 0.22
SV2B-204ENST00000553727 LARGE1O95461 756 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 IGHA2P01877 340 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 HOXA13P31271 388 aaPredicted RBP16.45■□□□□ 0.22
SV2B-204ENST00000553727 SOX10P56693 466 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 SSRP1Q08945 709 aaKnown RBP16.45■□□□□ 0.22
SV2B-204ENST00000553727 MAP3K21Q5TCX8 1036 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 WWC2Q6AWC2 1192 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 MAMDC4Q6UXC1 1216 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 ARMCX2Q7L311 632 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 TRIM22Q8IYM9 498 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 TAAR1Q96RJ0 339 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.45■□□□□ 0.22
SV2B-204ENST00000553727 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.45■□□□□ 0.22
SV2B-204ENST00000553727 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
SV2B-204ENST00000553727 LIMCH1Q9UPQ0 1083 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 CNPY2Q9Y2B0 182 aa16.45■□□□□ 0.22
SV2B-204ENST00000553727 DDX49Q9Y6V7 483 aaKnown RBP16.45■□□□□ 0.22
SV2B-204ENST00000553727 BAZ2BQ9UIF8 2168 aaKnown RBP16.45■□□□□ 0.22
SV2B-204ENST00000553727 ST18O60284 1047 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 SNAI1O95863 264 aaPredicted RBP16.44■□□□□ 0.22
SV2B-204ENST00000553727 SCG2P13521 617 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
SV2B-204ENST00000553727 HSD17B4P51659 736 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 NAPAP54920 295 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 PFKFB3Q16875 520 aaPredicted RBP16.44■□□□□ 0.22
SV2B-204ENST00000553727 FCHSD1Q86WN1 690 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 TRPV1Q8NER1 839 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 CUL5Q93034 780 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 DEFB118Q96PH6 123 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 RMDN3Q96TC7 470 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
SV2B-204ENST00000553727 MAF1Q9H063 256 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 PSTPIP2Q9H939 334 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 COL20A1Q9P218 1284 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 SMCHD1A6NHR9 2005 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 ASTN1O14525 1302 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
SV2B-204ENST00000553727 DTNBO60941 627 aa16.43■□□□□ 0.22
SV2B-204ENST00000553727 CDKL5O76039 1030 aa16.43■□□□□ 0.22
SV2B-204ENST00000553727 CYBAP13498 195 aa16.43■□□□□ 0.22
SV2B-204ENST00000553727 ARHGEF16Q5VV41 709 aa16.43■□□□□ 0.22
SV2B-204ENST00000553727 EEPD1Q7L9B9 569 aa16.43■□□□□ 0.22
SV2B-204ENST00000553727 SAMD3Q8N6K7 520 aa16.43■□□□□ 0.22
SV2B-204ENST00000553727 DNERQ8NFT8 737 aa16.43■□□□□ 0.22
SV2B-204ENST00000553727 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
SV2B-204ENST00000553727 MPHOSPH6Q99547 160 aaKnown RBP16.43■□□□□ 0.22
SV2B-204ENST00000553727 BARHL2Q9NY43 387 aa16.43■□□□□ 0.22
SV2B-204ENST00000553727 MAP3K20Q9NYL2 800 aaKnown RBP16.43■□□□□ 0.22
SV2B-204ENST00000553727 ZHX1Q9UKY1 873 aaPredicted RBP16.43■□□□□ 0.22
SV2B-204ENST00000553727 POTEFA5A3E0 1075 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 B4DLN1 442 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 hCG_1984214I3L0E3 225 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 STXBP3O00186 592 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 GJB1P08034 283 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
SV2B-204ENST00000553727 PDE4DQ08499 809 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 ACVR2BQ13705 512 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 PKN1Q16512 942 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 USP17L6PQ6QN14 398 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 ZNF713Q8N859 430 aaPredicted RBP16.42■□□□□ 0.22
SV2B-204ENST00000553727 NSUN6Q8TEA1 469 aaKnown RBP16.42■□□□□ 0.22
SV2B-204ENST00000553727 GTF3C6Q969F1 213 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 ZSCAN31Q96LW9 406 aaPredicted RBP16.42■□□□□ 0.22
SV2B-204ENST00000553727 ABHD16BQ9H3Z7 469 aa16.42■□□□□ 0.22
SV2B-204ENST00000553727 PAK6Q9NQU5 681 aaPredicted RBP16.42■□□□□ 0.22
SV2B-204ENST00000553727 ZNFX1Q9P2E3 1918 aaKnown RBP16.42■□□□□ 0.22
SV2B-204ENST00000553727 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
SV2B-204ENST00000553727 TFRCP02786 760 aaKnown RBP16.41■□□□□ 0.22
SV2B-204ENST00000553727 ZNF865P0CJ78 1059 aaPredicted RBP16.41■□□□□ 0.22
SV2B-204ENST00000553727 EIF2AK2P19525 551 aaKnown RBP16.41■□□□□ 0.22
SV2B-204ENST00000553727 GHRHRQ02643 423 aa16.41■□□□□ 0.22
SV2B-204ENST00000553727 ANO1Q5XXA6 986 aa16.41■□□□□ 0.22
SV2B-204ENST00000553727 TYW1BQ6NUM6 668 aa16.41■□□□□ 0.22
SV2B-204ENST00000553727 U2AF1L4Q8WU68 220 aaKnown RBP16.41■□□□□ 0.22
SV2B-204ENST00000553727 NRBP1Q9UHY1 535 aa16.41■□□□□ 0.22
SV2B-204ENST00000553727 MEIS2O14770 477 aa16.4■□□□□ 0.22
SV2B-204ENST00000553727 SEPT4O43236 478 aa16.4■□□□□ 0.22
SV2B-204ENST00000553727 DEXIO95424 95 aa16.4■□□□□ 0.22
SV2B-204ENST00000553727 SGPL1O95470 568 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms