RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 IRS4O14654 1257 aaPredicted RBP6.59□□□□□ -1.35
SCFD1-210ENST00000553693 MSL3P1P0C860 447 aa6.59□□□□□ -1.35
SCFD1-210ENST00000553693 DPY19L1Q2PZI1 675 aa6.59□□□□□ -1.35
SCFD1-210ENST00000553693 GGNQ86UU5 652 aa6.59□□□□□ -1.35
SCFD1-210ENST00000553693 NLGN2Q8NFZ4 835 aa6.59□□□□□ -1.35
SCFD1-210ENST00000553693 C2orf71A6NGG8 1288 aa6.58□□□□□ -1.36
SCFD1-210ENST00000553693 FOXD2O60548 495 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-210ENST00000553693 SSBP05455 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
SCFD1-210ENST00000553693 DBHP09172 617 aa6.58□□□□□ -1.36
SCFD1-210ENST00000553693 LDHDQ86WU2 507 aa6.58□□□□□ -1.36
SCFD1-210ENST00000553693 APBA2Q99767 749 aa6.58□□□□□ -1.36
SCFD1-210ENST00000553693 AKT3Q9Y243 479 aa6.58□□□□□ -1.36
SCFD1-210ENST00000553693 VAMP4O75379 141 aa6.57□□□□□ -1.36
SCFD1-210ENST00000553693 PFKLP17858 780 aa6.57□□□□□ -1.36
SCFD1-210ENST00000553693 PAMP19021 973 aa6.57□□□□□ -1.36
SCFD1-210ENST00000553693 TACR1P25103 407 aa6.57□□□□□ -1.36
SCFD1-210ENST00000553693 MCMBPQ9BTE3 642 aa6.57□□□□□ -1.36
SCFD1-210ENST00000553693 ACTR10Q9NZ32 417 aa6.57□□□□□ -1.36
SCFD1-210ENST00000553693 APEX2Q9UBZ4 518 aa6.57□□□□□ -1.36
SCFD1-210ENST00000553693 NPHP3-ACAD11A0A0J9YXS1 232 aa6.56□□□□□ -1.36
SCFD1-210ENST00000553693 NOP56O00567 594 aaKnown RBP6.56□□□□□ -1.36
SCFD1-210ENST00000553693 SMAD7O15105 426 aaKnown RBP6.56□□□□□ -1.36
SCFD1-210ENST00000553693 AFF3P51826 1226 aaKnown RBP6.56□□□□□ -1.36
SCFD1-210ENST00000553693 ZNF200P98182 395 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-210ENST00000553693 TARBP2Q15633 366 aaKnown RBP6.56□□□□□ -1.36
SCFD1-210ENST00000553693 IGDCC3Q8IVU1 814 aa6.56□□□□□ -1.36
SCFD1-210ENST00000553693 LZTR1Q8N653 840 aa6.56□□□□□ -1.36
SCFD1-210ENST00000553693 DBR1Q9UK59 544 aaKnown RBP6.56□□□□□ -1.36
SCFD1-210ENST00000553693 EMC9Q9Y3B6 208 aa6.56□□□□□ -1.36
SCFD1-210ENST00000553693 PCDHA5Q9Y5H7 936 aa6.56□□□□□ -1.36
SCFD1-210ENST00000553693 A0A0G2JLL6 359 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-210ENST00000553693 NPHS1O60500 1241 aa6.55□□□□□ -1.36
SCFD1-210ENST00000553693 KCNH1O95259 989 aa6.55□□□□□ -1.36
SCFD1-210ENST00000553693 CNKSR3Q6P9H4 555 aa6.55□□□□□ -1.36
SCFD1-210ENST00000553693 ZNF513Q8N8E2 541 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-210ENST00000553693 BVESQ8NE79 360 aa6.55□□□□□ -1.36
SCFD1-210ENST00000553693 PPP1R14AQ96A00 147 aa6.55□□□□□ -1.36
SCFD1-210ENST00000553693 DACT3Q96B18 629 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-210ENST00000553693 BUB1BO60566 1050 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-210ENST00000553693 GLI4P10075 376 aa6.54□□□□□ -1.36
SCFD1-210ENST00000553693 LARP1BQ659C4 914 aaKnown RBP6.54□□□□□ -1.36
SCFD1-210ENST00000553693 TRIM59Q8IWR1 403 aa6.54□□□□□ -1.36
SCFD1-210ENST00000553693 NETO2Q8NC67 525 aa6.54□□□□□ -1.36
SCFD1-210ENST00000553693 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.54□□□□□ -1.362e-9■□□□□ 9.9
SCFD1-210ENST00000553693 RNF38Q9H0F5 515 aa6.54□□□□□ -1.36
SCFD1-210ENST00000553693 PARD6AQ9NPB6 346 aa6.54□□□□□ -1.36
SCFD1-210ENST00000553693 PRKAG3Q9UGI9 489 aa6.54□□□□□ -1.36
SCFD1-210ENST00000553693 NUDT5Q9UKK9 219 aa6.54□□□□□ -1.36
SCFD1-210ENST00000553693 MRVI1Q9Y6F6 885 aa6.54□□□□□ -1.36
SCFD1-210ENST00000553693 IRS2Q9Y4H2 1338 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 F8W031 263 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-210ENST00000553693 IGFBP6P24592 240 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-210ENST00000553693 NCKAP1LP55160 1127 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 ARID5AQ03989 594 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 SCRN1Q12765 414 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 GTF2IRD2BQ6EKJ0 949 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 C6orf15Q6UXA7 325 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-210ENST00000553693 GTF2IRD2Q86UP8 949 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 FAM129CQ86XR2 697 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 TMEFF1Q8IYR6 380 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 NLGN1Q8N2Q7 840 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 PANK1Q8TE04 598 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 PEX11GQ96HA9 241 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 ZCCHC4Q9H5U6 513 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 EPB41L4AQ9HCS5 686 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-210ENST00000553693 RWDD3Q9Y3V2 267 aa6.53□□□□□ -1.36
SCFD1-210ENST00000553693 BMP7P18075 431 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 PRR5P85299 388 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 NFKB2Q00653 900 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 FXNQ16595 210 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 CPNE8Q86YQ8 564 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 FAM178BQ8IXR5 827 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 USP33Q8TEY7 942 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 COPS5Q92905 334 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 TSPAN17Q96FV3 270 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 MMP19Q99542 508 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.52□□□□□ -1.375e-7■■■□□ 17.9
SCFD1-210ENST00000553693 CLEC1BQ9P126 229 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 GULP1Q9UBP9 304 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 FAN1Q9Y2M0 1017 aa6.52□□□□□ -1.37
SCFD1-210ENST00000553693 ZC3H12DA2A288 527 aaKnown RBP6.51□□□□□ -1.37
SCFD1-210ENST00000553693 SASH1O94885 1247 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 FGRP09769 529 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 PLS3P13797 630 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 FBLN1P23142 703 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 SLC9A5Q14940 896 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 WWC2Q6AWC2 1192 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 SP8Q8IXZ3 490 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 ALG3Q92685 438 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 MRGPRX3Q96LB0 322 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 PWWP2AQ96N64 755 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 TINF2Q9BSI4 451 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 MTA3Q9BTC8 594 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 NKX2-4Q9H2Z4 354 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 CYP26B1Q9NR63 512 aa6.51□□□□□ -1.37
SCFD1-210ENST00000553693 C7orf72A4D263 438 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 SUSD5O60279 629 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 TRIM13O60858 407 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 DDAH1O94760 285 aa6.5□□□□□ -1.37
SCFD1-210ENST00000553693 NCAM1P13591 858 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms