RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 KRTAP9-6A0A140TA67 174 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 MYOCOSA0A1B0GUC4 107 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 KRT1P04264 644 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 THBDP07204 575 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 GTF2A2P52657 109 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 GFRA1P56159 465 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 MAP4K2Q12851 820 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 KCNAB2Q13303 367 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 RASGRF1Q13972 1273 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 HSP90AA2PQ14568 343 aaPredicted RBP5.21□□□□□ -1.58
VRK1-202ENST00000553683 ZNF605Q86T29 641 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 CABP7Q86V35 215 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 SIRT2Q8IXJ6 389 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 LRRC47Q8N1G4 583 aaKnown RBP5.21□□□□□ -1.58
VRK1-202ENST00000553683 LZTR1Q8N653 840 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 NETO2Q8NC67 525 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 PPP1R14AQ96A00 147 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 KLHL14Q9P2G3 628 aa5.21□□□□□ -1.58
VRK1-202ENST00000553683 A0A1W2PQJ5 194 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 A0A1W2PQU0 124 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 C7orf72A4D263 438 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 DBHP09172 617 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 GLI4P10075 376 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 FGFR1P11362 822 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 PLS3P13797 630 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 DLG4P78352 724 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 CYP4F3Q08477 520 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 SERINC3Q13530 473 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 SLC9A5Q14940 896 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 LONRF2Q1L5Z9 754 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 RSPO2Q6UXX9 243 aaPredicted RBP5.2□□□□□ -1.58
VRK1-202ENST00000553683 ANKLE2Q86XL3 938 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 Q8N1Y9 231 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 KREMEN2Q8NCW0 462 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 FRS2Q8WU20 508 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 MTA3Q9BTC8 594 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 CD320Q9NPF0 282 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 ST7Q9NRC1 585 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 SIRT5Q9NXA8 310 aa5.2□□□□□ -1.58
VRK1-202ENST00000553683 TCAF2A6NFQ2 919 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 ETV2O00321 342 aaPredicted RBP5.19□□□□□ -1.58
VRK1-202ENST00000553683 PDPK1O15530 556 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 ZBTB7AO95365 584 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 SNRPB2P08579 225 aaKnown RBP5.19□□□□□ -1.58
VRK1-202ENST00000553683 MSL3P1P0C860 447 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 VIPR1P32241 457 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 PPP2R2AP63151 447 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 SRSF3P84103 164 aaKnown RBP5.19□□□□□ -1.58
VRK1-202ENST00000553683 RAB3GAP1Q15042 981 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 ZC3H12BQ5HYM0 836 aaKnown RBP5.19□□□□□ -1.58
VRK1-202ENST00000553683 SLC35F1Q5T1Q4 408 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 TMEM132EQ6IEE7 984 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 ZC3H14Q6PJT7 736 aaKnown RBP5.19□□□□□ -1.58
VRK1-202ENST00000553683 RPTNQ6XPR3 784 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 DPH6Q7L8W6 267 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 CILP2Q8IUL8 1156 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 BTN2A2Q8WVV5 523 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 SREK1Q8WXA9 508 aaKnown RBP5.19□□□□□ -1.58
VRK1-202ENST00000553683 KCTD13Q8WZ19 329 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 TOX2Q96NM4 488 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 CLEC1BQ9P126 229 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 MBD1Q9UIS9 605 aaPredicted RBP5.19□□□□□ -1.58
VRK1-202ENST00000553683 NUDT5Q9UKK9 219 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 NPFFR2Q9Y5X5 522 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 IRS2Q9Y4H2 1338 aa5.19□□□□□ -1.58
VRK1-202ENST00000553683 N4BP3O15049 544 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 MEFVO15553 781 aaPredicted RBP5.18□□□□□ -1.58
VRK1-202ENST00000553683 MYO1BO43795 1136 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 C1QTNF9P0C862 333 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 GTF2F1P35269 517 aaKnown RBP eCLIP5.18□□□□□ -1.58
VRK1-202ENST00000553683 LTBRP36941 435 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 GALK1P51570 392 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 KIR3DS1Q14943 382 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 BICRALQ6AI39 1079 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 ATG14Q6ZNE5 492 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 RIOX2Q8IUF8 465 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 DIO2Q92813 273 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 TSPAN17Q96FV3 270 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 C1orf159Q96HA4 380 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 PEX11GQ96HA9 241 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 AARSD1Q9BTE6 412 aaKnown RBP5.18□□□□□ -1.58
VRK1-202ENST00000553683 RNF38Q9H0F5 515 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 GCM1Q9NP62 436 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 GPRC5CQ9NQ84 441 aa5.18□□□□□ -1.58
VRK1-202ENST00000553683 PPP1R1BQ9UD71 204 aaPredicted RBP5.18□□□□□ -1.58
VRK1-202ENST00000553683 TIMM13Q9Y5L4 95 aaPredicted RBP5.18□□□□□ -1.58
VRK1-202ENST00000553683 TBX1O43435 398 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 SLC6A11P48066 632 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 RPL11P62913 178 aaKnown RBP5.17□□□□□ -1.58
VRK1-202ENST00000553683 CAP1Q01518 475 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 TARBP2Q15633 366 aaKnown RBP5.17□□□□□ -1.58
VRK1-202ENST00000553683 KCNA10Q16322 511 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 PLEKHN1Q494U1 663 aaPredicted RBP5.17□□□□□ -1.58
VRK1-202ENST00000553683 MROH9Q5TGP6 573 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 CPNE8Q86YQ8 564 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 SIAH1Q8IUQ4 282 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 ZSCAN18Q8TBC5 510 aaPredicted RBP5.17□□□□□ -1.58
VRK1-202ENST00000553683 PLEKHO2Q8TD55 490 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 ZFYVE21Q9BQ24 234 aa5.17□□□□□ -1.58
VRK1-202ENST00000553683 CNTD2Q9H8S5 307 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms