RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 GUCY1A3Q02108 690 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 CWF19L1Q69YN2 538 aaKnown RBP5.22□□□□□ -1.57
TDP1-207ENST00000553617 RCSD1Q6JBY9 416 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 PAOXQ6QHF9 649 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 IFNL3Q8IZI9 196 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 ZNF655Q8N720 491 aaPredicted RBP5.22□□□□□ -1.57
TDP1-207ENST00000553617 GIMAP7Q8NHV1 300 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 USP7Q93009 1102 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 WNK4Q96J92 1243 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 GPRC5CQ9NQ84 441 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 SAMD15Q9P1V8 674 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 PCDHA8Q9Y5H6 950 aa5.22□□□□□ -1.57
TDP1-207ENST00000553617 ZNF891A8MT65 544 aaPredicted RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 K7ESF4 209 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 TRAF5O00463 557 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 GABRDO14764 452 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 AKAP10O43572 662 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 MSCO60682 206 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 ZNF205O95201 554 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 CBX7O95931 251 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 SCGB1D2O95969 90 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 LTBRP36941 435 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 ADCYAP1R1P41586 468 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 SCNN1BP51168 640 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 MECP2P51608 486 aaKnown RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 TMPRSS15P98073 1019 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 ITKQ08881 620 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 PPP2R5AQ15172 486 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 LRRC41Q15345 812 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 NFKBIBQ15653 356 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 OGFOD3Q6PK18 319 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 LBX2Q6XYB7 198 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 BEND4Q6ZU67 534 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 DDX53Q86TM3 631 aaKnown RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 MTDHQ86UE4 582 aaKnown RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 ALYREFQ86V81 257 aaKnown RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 MFSD4AQ8N468 514 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 SMC1BQ8NDV3 1235 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 MTMR8Q96EF0 704 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 TCTN2Q96GX1 697 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 SSBP4Q9BWG4 385 aaPredicted RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 CELF4Q9BZC1 486 aaKnown RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 CCDC8Q9H0W5 538 aaPredicted RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 ASCC2Q9H1I8 757 aaPredicted RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 DUSP15Q9H1R2 295 aaPredicted RBP5.21□□□□□ -1.58
TDP1-207ENST00000553617 GTF2IRD1Q9UHL9 959 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 TRHDEQ9UKU6 1024 aa5.21□□□□□ -1.58
TDP1-207ENST00000553617 M0R2C6 588 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 PRC1O43663 620 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 LCP1P13796 627 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 PLS3P13797 630 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 VAV1P15498 845 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 ADMP35318 185 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 NOP2P46087 812 aaKnown RBP5.2□□□□□ -1.58
TDP1-207ENST00000553617 RAB27AP51159 221 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 KCNAB2Q13303 367 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 PIN1Q13526 163 aaPredicted RBP5.2□□□□□ -1.58
TDP1-207ENST00000553617 RTP2Q5QGT7 225 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 SYDE2Q5VT97 1194 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 ZAR1Q86SH2 424 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 TXNRD3Q86VQ6 643 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 CLEC10AQ8IUN9 316 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 CCDC146Q8IYE0 955 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 CNTD1Q8N815 330 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 IGSF22Q8N9C0 903 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 PCDH19Q8TAB3 1148 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 COG1Q8WTW3 980 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 CHMP4CQ96CF2 233 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 CAMKK2Q96RR4 588 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 MMP19Q99542 508 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 FAM83CQ9BQN1 747 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 CDH19Q9H159 772 aa5.2□□□□□ -1.58
TDP1-207ENST00000553617 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.2□□□□□ -1.58
TDP1-207ENST00000553617 E2F8A0AVK6 867 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 PRKD3O94806 890 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 EEF1DP3Q658K8 133 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 IQCEQ6IPM2 695 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 NXPE1Q8N323 547 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 USHBP1Q8N6Y0 703 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 RCBTB1Q8NDN9 531 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 DIO2Q92813 273 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 SMAD5Q99717 465 aaKnown RBP5.19□□□□□ -1.58
TDP1-207ENST00000553617 YIPF4Q9BSR8 244 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 MENTQ9BUN1 341 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 RTFDC1Q9BY42 306 aaPredicted RBP5.19□□□□□ -1.58
TDP1-207ENST00000553617 KCNF1Q9H3M0 494 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 CLEC1BQ9P126 229 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 B4GALT6Q9UBX8 382 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 COQ6Q9Y2Z9 468 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 SPEF1Q9Y4P9 236 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 TNKSO95271 1327 aa5.19□□□□□ -1.58
TDP1-207ENST00000553617 ARID4BQ4LE39 1312 aaPredicted RBP5.19□□□□□ -1.58
TDP1-207ENST00000553617 WDR64B1ANS9 1081 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 KIF3BO15066 747 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 FGF10O15520 208 aaPredicted RBP5.18□□□□□ -1.58
TDP1-207ENST00000553617 DHX15O43143 795 aaKnown RBP5.18□□□□□ -1.58
TDP1-207ENST00000553617 FKBP9O95302 570 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 APPP05067 770 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 PYGMP11217 842 aa5.18□□□□□ -1.58
TDP1-207ENST00000553617 YBX3P16989 372 aaKnown RBP eCLIP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms