RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FAM50BQ9Y247 325 aa16.53■□□□□ 0.24
PRPF39-204ENST00000553605 TET1Q8NFU7 2136 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 GJB5O95377 273 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 RASA1P20936 1047 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 ADD2P35612 726 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 ZP2Q05996 745 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 TRERF1Q96PN7 1200 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 CRBNQ96SW2 442 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 WDR11Q9BZH6 1224 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 MKNK2Q9HBH9 465 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 NOD1Q9Y239 953 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 SLC4A4Q9Y6R1 1079 aa16.52■□□□□ 0.24
PRPF39-204ENST00000553605 PTPRSQ13332 1948 aa16.52■□□□□ 0.23
PRPF39-204ENST00000553605 ZNF318Q5VUA4 2279 aa16.52■□□□□ 0.23
PRPF39-204ENST00000553605 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
PRPF39-204ENST00000553605 FOXK2Q01167 660 aa16.51■□□□□ 0.23
PRPF39-204ENST00000553605 PTPN11Q06124 597 aaPredicted RBP16.51■□□□□ 0.23
PRPF39-204ENST00000553605 TKFCQ3LXA3 575 aa16.51■□□□□ 0.23
PRPF39-204ENST00000553605 ERC1Q8IUD2 1116 aa16.51■□□□□ 0.23
PRPF39-204ENST00000553605 RPAP2Q8IXW5 612 aaPredicted RBP16.51■□□□□ 0.23
PRPF39-204ENST00000553605 STK11IPQ8N1F8 1099 aa16.51■□□□□ 0.23
PRPF39-204ENST00000553605 MKL1Q969V6 931 aa16.51■□□□□ 0.23
PRPF39-204ENST00000553605 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
PRPF39-204ENST00000553605 TANC1Q9C0D5 1861 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 BMP3P12645 472 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 ALAS1P13196 640 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 PTPN5P54829 565 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 GPNMBQ14956 572 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 BRDTQ58F21 947 aaPredicted RBP16.5■□□□□ 0.23
PRPF39-204ENST00000553605 CNKSR3Q6P9H4 555 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 ADHFE1Q8IWW8 467 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 FBXO22Q8NEZ5 403 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 PRSS33Q8NF86 280 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 OR6J1Q8NGC5 347 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 MORC4Q8TE76 937 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 AFAP1L1Q8TED9 768 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 MRPL38Q96DV4 380 aaKnown RBP16.5■□□□□ 0.23
PRPF39-204ENST00000553605 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 CYP39A1Q9NYL5 469 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 ARPP21Q9UBL0 812 aaPredicted RBP16.5■□□□□ 0.23
PRPF39-204ENST00000553605 EXOC6BQ9Y2D4 811 aa16.5■□□□□ 0.23
PRPF39-204ENST00000553605 GREB1LQ9C091 1923 aaPredicted RBP16.5■□□□□ 0.23
PRPF39-204ENST00000553605 IGKV6D-41A0A0C4DH26 115 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 KPNA6O60684 536 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 IRS1P35568 1242 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 PTPROQ16827 1216 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 SLFN13Q68D06 897 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 EP400NLQ6ZTU2 488 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 CCDC155Q8N6L0 562 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 CAGE1Q8TC20 777 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 CFAP54Q96N23 3096 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 PURBQ96QR8 312 aaKnown RBP16.49■□□□□ 0.23
PRPF39-204ENST00000553605 C17orf80Q9BSJ5 609 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRPF39-204ENST00000553605 TRIOO75962 3097 aa16.49■□□□□ 0.23
PRPF39-204ENST00000553605 ABHD14A-ACY1A0A1B0GW23 586 aa16.48■□□□□ 0.23
PRPF39-204ENST00000553605 STAT2P52630 851 aa16.48■□□□□ 0.23
PRPF39-204ENST00000553605 PTGISQ16647 500 aa16.48■□□□□ 0.23
PRPF39-204ENST00000553605 MUM1L1Q5H9M0 696 aa16.48■□□□□ 0.23
PRPF39-204ENST00000553605 IER5LQ5T953 404 aa16.48■□□□□ 0.23
PRPF39-204ENST00000553605 FAM117BQ6P1L5 589 aa16.48■□□□□ 0.23
PRPF39-204ENST00000553605 LRRC47Q8N1G4 583 aaKnown RBP16.48■□□□□ 0.23
PRPF39-204ENST00000553605 CHURC1Q8WUH1 139 aa16.48■□□□□ 0.23
PRPF39-204ENST00000553605 PABPC5Q96DU9 382 aaKnown RBP16.48■□□□□ 0.23
PRPF39-204ENST00000553605 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
PRPF39-204ENST00000553605 ISY1Q9ULR0 285 aaKnown RBP16.48■□□□□ 0.23
PRPF39-204ENST00000553605 SYNPO2Q9UMS6 1093 aa16.48■□□□□ 0.23
PRPF39-204ENST00000553605 SCN10AQ9Y5Y9 1956 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 SIP14410 1827 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 RBM47A0AV96 593 aaKnown RBP16.47■□□□□ 0.23
PRPF39-204ENST00000553605 PARNO95453 639 aaKnown RBP16.47■□□□□ 0.23
PRPF39-204ENST00000553605 CHGBP05060 677 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 SELPP16109 830 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 IKQ13123 557 aaPredicted RBP16.47■□□□□ 0.23
PRPF39-204ENST00000553605 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 HERC4Q5GLZ8 1057 aaPredicted RBP16.47■□□□□ 0.23
PRPF39-204ENST00000553605 NSMFQ6X4W1 530 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 LRRC8DQ7L1W4 858 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 FAM160B2Q86V87 743 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 BANK1Q8NDB2 785 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 CEP95Q96GE4 821 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 PRRX2Q99811 253 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 MTMR4Q9NYA4 1195 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 MUTYHQ9UIF7 546 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 INSL6Q9Y581 213 aa16.47■□□□□ 0.23
PRPF39-204ENST00000553605 RAD50Q92878 1312 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 TRIP12Q14669 1992 aaPredicted RBP16.46■□□□□ 0.23
PRPF39-204ENST00000553605 A6NJR5 290 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 MINDY4BA8MYZ0 360 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 EFCAB14O75071 495 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 TTLL1O95922 423 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 CXCL10P02778 98 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 CHMP4BP1P59074 171 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 IKBKEQ14164 716 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 TCTN1Q2MV58 587 aa16.46■□□□□ 0.23
PRPF39-204ENST00000553605 TIGD5Q53EQ6 642 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms