RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 B4DLN1 442 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 ARVCFO00192 962 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 CTAGE5O15320 804 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 CDK7P50613 346 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 MRPL12P52815 198 aaKnown RBP17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 FPGSQ05932 587 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 FSCN1Q16658 493 aaKnown RBP17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 ASPRV1Q53RT3 343 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 TAPT1Q6NXT6 567 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 EEPD1Q7L9B9 569 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 CLEC4DQ8WXI8 215 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 UBAC1Q9BSL1 405 aa17.71■□□□□ 0.43
SDR39U1-205ENST00000553546 TNKSO95271 1327 aa17.71■□□□□ 0.42
SDR39U1-205ENST00000553546 SMPD1P17405 629 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 ITGB8P26012 769 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 PDE4AP27815 886 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 BEX3Q00994 111 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 C9orf50Q5SZB4 431 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 ZNF697Q5TEC3 545 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 SLC30A10Q6XR72 485 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 ENAHQ8N8S7 591 aaPredicted RBP17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 DNERQ8NFT8 737 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 ZSWIM5Q9P217 1185 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 TBX21Q9UL17 535 aa17.7■□□□□ 0.42
SDR39U1-205ENST00000553546 DYNC1LI2O43237 492 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 TIMP1P01033 207 aa17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 GOLGA8HP0CJ92 632 aa17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 GSPT1P15170 499 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 CALML3P27482 149 aa17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 RPS6P62753 249 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 SMAD3P84022 425 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 DUSP28Q4G0W2 176 aa17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 RGS22Q8NE09 1264 aa17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 MAFAQ8NHW3 353 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 RNPC3Q96LT9 517 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 PURBQ96QR8 312 aaKnown RBP17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 CDX2Q99626 313 aaPredicted RBP17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 PDGFCQ9NRA1 345 aa17.69■□□□□ 0.42
SDR39U1-205ENST00000553546 PARP1P09874 1014 aaKnown RBP17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 PDE4DQ08499 809 aa17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 TRDNQ13061 729 aa17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 CDC37Q16543 378 aaPredicted RBP17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 USH1GQ495M9 461 aa17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 IFIT1BQ5T764 474 aaKnown RBP17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 MFSD5Q6N075 450 aa17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 CXCL17Q6UXB2 119 aa17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 FAM126BQ8IXS8 530 aa17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 UBA5Q9GZZ9 404 aa17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 DDX49Q9Y6V7 483 aaKnown RBP17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 ABCB11O95342 1321 aa17.68■□□□□ 0.42
SDR39U1-205ENST00000553546 MYH6P13533 1939 aa17.67■□□□□ 0.42
SDR39U1-205ENST00000553546 RBM47A0AV96 593 aaKnown RBP17.67■□□□□ 0.42
SDR39U1-205ENST00000553546 NKRFO15226 690 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDR39U1-205ENST00000553546 SLC43A3Q8NBI5 491 aa17.67■□□□□ 0.42
SDR39U1-205ENST00000553546 WDR11Q9BZH6 1224 aa17.67■□□□□ 0.42
SDR39U1-205ENST00000553546 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
SDR39U1-205ENST00000553546 DHX16O60231 1041 aaKnown RBP17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 EDNRBP24530 442 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 CPT1AP50416 773 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 PPIGQ13427 754 aaKnown RBP eCLIP17.66■□□□□ 0.425e-7■■■□□ 18.4
SDR39U1-205ENST00000553546 ITGA7Q13683 1181 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 BRDTQ58F21 947 aaPredicted RBP17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 MCF2L2Q86YR7 1114 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 ADGRF4Q8IZF3 695 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 TMEM199Q8N511 208 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 SCFD2Q8WU76 684 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 IL25Q9H293 177 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 CPVLQ9H3G5 476 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 POLR3EQ9NVU0 708 aa17.66■□□□□ 0.42
SDR39U1-205ENST00000553546 CD4P01730 458 aa17.65■□□□□ 0.42
SDR39U1-205ENST00000553546 CHMLP26374 656 aa17.65■□□□□ 0.42
SDR39U1-205ENST00000553546 EPHB4P54760 987 aa17.65■□□□□ 0.42
SDR39U1-205ENST00000553546 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
SDR39U1-205ENST00000553546 FBXO11Q86XK2 927 aa17.65■□□□□ 0.42
SDR39U1-205ENST00000553546 MYLIPQ8WY64 445 aa17.65■□□□□ 0.42
SDR39U1-205ENST00000553546 MRPL11Q9Y3B7 192 aaKnown RBP17.65■□□□□ 0.42
SDR39U1-205ENST00000553546 TMEM265A0A087WTH1 108 aa17.64■□□□□ 0.41
SDR39U1-205ENST00000553546 COL9A1P20849 921 aa17.64■□□□□ 0.41
SDR39U1-205ENST00000553546 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
SDR39U1-205ENST00000553546 QRICH1Q2TAL8 776 aa17.64■□□□□ 0.41
SDR39U1-205ENST00000553546 OR6J1Q8NGC5 347 aa17.64■□□□□ 0.41
SDR39U1-205ENST00000553546 TTYH1Q9H313 450 aaPredicted RBP17.64■□□□□ 0.41
SDR39U1-205ENST00000553546 ERICH2A1L162 156 aa17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 SART3Q15020 963 aaKnown RBP17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 SEC23AQ15436 765 aa17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 PSRC1Q6PGN9 363 aaPredicted RBP17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 RALYLQ86SE5 291 aaKnown RBP17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 NSUN6Q8TEA1 469 aaKnown RBP17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 PPP1R12CQ9BZL4 782 aa17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 SEMA6BQ9H3T3 888 aa17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 JMJD4Q9H9V9 463 aa17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 GPHNQ9NQX3 736 aaPredicted RBP17.63■□□□□ 0.41
SDR39U1-205ENST00000553546 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 SGSM2O43147 1006 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 KPNA6O60684 536 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 CYP21A2P08686 494 aa17.62■□□□□ 0.41
SDR39U1-205ENST00000553546 PTGS1P23219 599 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms