RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 PTPDC1A2A3K4 754 aa21.39■■□□□ 1.01
CPSF2-202ENST00000553427 EVCP57679 992 aa21.39■■□□□ 1.01
CPSF2-202ENST00000553427 CCDC144CPQ8IYA2 1237 aa21.39■■□□□ 1.01
CPSF2-202ENST00000553427 DNERQ8NFT8 737 aa21.39■■□□□ 1.01
CPSF2-202ENST00000553427 RRP36Q96EU6 259 aaKnown RBP21.39■■□□□ 1.01
CPSF2-202ENST00000553427 KATNBL1Q9H079 304 aa21.39■■□□□ 1.01
CPSF2-202ENST00000553427 MAP3K20Q9NYL2 800 aaKnown RBP21.39■■□□□ 1.01
CPSF2-202ENST00000553427 PCDHA1Q9Y5I3 950 aa21.39■■□□□ 1.01
CPSF2-202ENST00000553427 CYP46A1Q9Y6A2 500 aa21.39■■□□□ 1.01
CPSF2-202ENST00000553427 MYH6P13533 1939 aa21.39■■□□□ 1.01
CPSF2-202ENST00000553427 OPLAHO14841 1288 aa21.38■■□□□ 1.01
CPSF2-202ENST00000553427 AKR1A1P14550 325 aa21.38■■□□□ 1.01
CPSF2-202ENST00000553427 CNGA1P29973 690 aa21.38■■□□□ 1.01
CPSF2-202ENST00000553427 RTN1Q16799 776 aa21.38■■□□□ 1.01
CPSF2-202ENST00000553427 PRAMEF19Q5SWL8 479 aa21.38■■□□□ 1.01
CPSF2-202ENST00000553427 BRF1Q92994 677 aa21.38■■□□□ 1.01
CPSF2-202ENST00000553427 LRRC37A2A6NM11 1700 aa21.38■■□□□ 1.01
CPSF2-202ENST00000553427 EDNRBP24530 442 aa21.37■■□□□ 1.01
CPSF2-202ENST00000553427 CALML3P27482 149 aa21.37■■□□□ 1.01
CPSF2-202ENST00000553427 MNX1P50219 401 aaPredicted RBP21.37■■□□□ 1.01
CPSF2-202ENST00000553427 ALDH5A1P51649 535 aaPredicted RBP21.37■■□□□ 1.01
CPSF2-202ENST00000553427 HSD17B4P51659 736 aa21.37■■□□□ 1.01
CPSF2-202ENST00000553427 ACVR2BQ13705 512 aa21.37■■□□□ 1.01
CPSF2-202ENST00000553427 RAB11FIP4Q86YS3 637 aa21.37■■□□□ 1.01
CPSF2-202ENST00000553427 SEC63Q9UGP8 760 aaKnown RBP21.37■■□□□ 1.01
CPSF2-202ENST00000553427 BAZ2BQ9UIF8 2168 aaKnown RBP21.37■■□□□ 1.01
CPSF2-202ENST00000553427 GOLGA8AA7E2F4 631 aa21.36■■□□□ 1.01
CPSF2-202ENST00000553427 GOLGA8BA8MQT2 603 aa21.36■■□□□ 1.01
CPSF2-202ENST00000553427 FUT2Q10981 343 aa21.36■■□□□ 1.01
CPSF2-202ENST00000553427 C8orf34Q49A92 452 aa21.36■■□□□ 1.01
CPSF2-202ENST00000553427 SYTL5Q8TDW5 730 aaPredicted RBP21.36■■□□□ 1.01
CPSF2-202ENST00000553427 PURBQ96QR8 312 aaKnown RBP21.36■■□□□ 1.01
CPSF2-202ENST00000553427 MPHOSPH6Q99547 160 aaKnown RBP21.36■■□□□ 1.01
CPSF2-202ENST00000553427 ZHX1Q9UKY1 873 aaPredicted RBP21.36■■□□□ 1.01
CPSF2-202ENST00000553427 CNTNAP5Q8WYK1 1306 aa21.35■■□□□ 1.01
CPSF2-202ENST00000553427 CCDC196A0A1B0GTZ2 297 aa21.35■■□□□ 1.01
CPSF2-202ENST00000553427 RARBP10826 455 aa21.35■■□□□ 1.01
CPSF2-202ENST00000553427 APOBRQ0VD83 1088 aa21.35■■□□□ 1.01
CPSF2-202ENST00000553427 VTA1Q9NP79 307 aa21.35■■□□□ 1.01
CPSF2-202ENST00000553427 FAM217BQ9NTX9 383 aaPredicted RBP21.35■■□□□ 1.01
CPSF2-202ENST00000553427 FAM184BQ9ULE4 1060 aa21.35■■□□□ 1.01
CPSF2-202ENST00000553427 PDE4DIPQ5VU43 2346 aa21.34■■□□□ 1.01
CPSF2-202ENST00000553427 MCM3APO60318 1980 aa21.34■■□□□ 1.01
CPSF2-202ENST00000553427 B4DLN1 442 aa21.34■■□□□ 1.01
CPSF2-202ENST00000553427 METAP2P50579 478 aaKnown RBP eCLIP21.34■■□□□ 1.01
CPSF2-202ENST00000553427 MRPL12P52815 198 aaKnown RBP21.34■■□□□ 1.01
CPSF2-202ENST00000553427 NECAB2Q7Z6G3 386 aa21.34■■□□□ 1.01
CPSF2-202ENST00000553427 TBC1D5Q92609 795 aa21.34■■□□□ 1.01
CPSF2-202ENST00000553427 UPF3BQ9BZI7 483 aaKnown RBP21.34■■□□□ 1.01
CPSF2-202ENST00000553427 DNM1LO00429 736 aa21.33■■□□□ 1.01
CPSF2-202ENST00000553427 SEC24BO95487 1268 aa21.33■■□□□ 1.01
CPSF2-202ENST00000553427 COL6A1P12109 1028 aa21.33■■□□□ 1.01
CPSF2-202ENST00000553427 TOB2Q14106 344 aaPredicted RBP21.33■■□□□ 1.01
CPSF2-202ENST00000553427 CMTR1Q8N1G2 835 aaKnown RBP21.33■■□□□ 1.01
CPSF2-202ENST00000553427 ARRDC4Q8NCT1 418 aa21.33■■□□□ 1.01
CPSF2-202ENST00000553427 ALDH8A1Q9H2A2 487 aaPredicted RBP21.33■■□□□ 1.01
CPSF2-202ENST00000553427 COL20A1Q9P218 1284 aa21.33■■□□□ 1.01
CPSF2-202ENST00000553427 DUSP11O75319 330 aaKnown RBP21.32■■□□□ 1
CPSF2-202ENST00000553427 CFBP00751 764 aa21.32■■□□□ 1
CPSF2-202ENST00000553427 CDC27P30260 824 aa21.32■■□□□ 1
CPSF2-202ENST00000553427 CCDC144BQ3MJ40 725 aa21.32■■□□□ 1
CPSF2-202ENST00000553427 TEX2Q8IWB9 1127 aa21.32■■□□□ 1
CPSF2-202ENST00000553427 NSUN6Q8TEA1 469 aaKnown RBP21.32■■□□□ 1
CPSF2-202ENST00000553427 DIS3LQ8TF46 1054 aaKnown RBP21.32■■□□□ 1
CPSF2-202ENST00000553427 PAWRQ96IZ0 340 aaKnown RBP21.32■■□□□ 1
CPSF2-202ENST00000553427 IWS1Q96ST2 819 aa21.32■■□□□ 1
CPSF2-202ENST00000553427 XPNPEP3Q9NQH7 507 aa21.32■■□□□ 1
CPSF2-202ENST00000553427 GCOM1H8Y6P7 765 aaPredicted RBP21.31■■□□□ 1
CPSF2-202ENST00000553427 POLR2MP0CAP2 368 aa21.31■■□□□ 1
CPSF2-202ENST00000553427 NKX3-2P78367 333 aa21.31■■□□□ 1
CPSF2-202ENST00000553427 PIBF1Q8WXW3 757 aa21.31■■□□□ 1
CPSF2-202ENST00000553427 RMDN3Q96TC7 470 aa21.31■■□□□ 1
CPSF2-202ENST00000553427 HTATIP2Q9BUP3 242 aa21.31■■□□□ 1
CPSF2-202ENST00000553427 C11orf49Q9H6J7 331 aa21.31■■□□□ 1
CPSF2-202ENST00000553427 PDRG1Q9NUG6 133 aa21.31■■□□□ 1
CPSF2-202ENST00000553427 RBM47A0AV96 593 aaKnown RBP21.3■■□□□ 1
CPSF2-202ENST00000553427 hCG_1984214I3L0E3 225 aa21.3■■□□□ 1
CPSF2-202ENST00000553427 PIK3CDO00329 1044 aa21.3■■□□□ 1
CPSF2-202ENST00000553427 ADAMTS4O75173 837 aa21.3■■□□□ 1
CPSF2-202ENST00000553427 PDIA3P30101 505 aaKnown RBP21.3■■□□□ 1
CPSF2-202ENST00000553427 PDE4DQ08499 809 aa21.3■■□□□ 1
CPSF2-202ENST00000553427 ANO1Q5XXA6 986 aa21.3■■□□□ 1
CPSF2-202ENST00000553427 TAPT1Q6NXT6 567 aa21.3■■□□□ 1
CPSF2-202ENST00000553427 FBXO16Q8IX29 292 aaPredicted RBP21.3■■□□□ 1
CPSF2-202ENST00000553427 ZNF713Q8N859 430 aaPredicted RBP21.3■■□□□ 1
CPSF2-202ENST00000553427 ZNF274Q96GC6 653 aaPredicted RBP21.3■■□□□ 1
CPSF2-202ENST00000553427 TAAR1Q96RJ0 339 aa21.3■■□□□ 1
CPSF2-202ENST00000553427 UPF3AQ9H1J1 476 aaKnown RBP21.3■■□□□ 1
CPSF2-202ENST00000553427 PXMP2Q9NR77 195 aa21.3■■□□□ 1
CPSF2-202ENST00000553427 RBM27Q9P2N5 1060 aaKnown RBP21.3■■□□□ 1
CPSF2-202ENST00000553427 NAP1L2Q9ULW6 460 aaPredicted RBP21.3■■□□□ 1
CPSF2-202ENST00000553427 DDX49Q9Y6V7 483 aaKnown RBP21.3■■□□□ 1
CPSF2-202ENST00000553427 FRMPD4Q14CM0 1322 aa21.29■■□□□ 1
CPSF2-202ENST00000553427 ADCY6O43306 1168 aa21.29■■□□□ 1
CPSF2-202ENST00000553427 CST5P28325 142 aaPredicted RBP21.29■■□□□ 1
CPSF2-202ENST00000553427 ADD1P35611 737 aaKnown RBP21.29■■□□□ 1
CPSF2-202ENST00000553427 LRRC41Q15345 812 aa21.29■■□□□ 1
CPSF2-202ENST00000553427 IQSEC1Q6DN90 963 aa21.29■■□□□ 1
CPSF2-202ENST00000553427 PPP1R18Q6NYC8 613 aa21.29■■□□□ 1
CPSF2-202ENST00000553427 RNF180Q86T96 592 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms