RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 MYADML2A6NDP7 307 aa21.82■■□□□ 1.08
HDAC4-217ENST00000553145 DUSP11O75319 330 aaKnown RBP21.82■■□□□ 1.08
HDAC4-217ENST00000553145 PTGS1P23219 599 aa21.82■■□□□ 1.08
HDAC4-217ENST00000553145 ADCYAP1R1P41586 468 aa21.82■■□□□ 1.08
HDAC4-217ENST00000553145 ATN1P54259 1190 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-217ENST00000553145 TAPT1Q6NXT6 567 aa21.82■■□□□ 1.08
HDAC4-217ENST00000553145 CTCFLQ8NI51 663 aaPredicted RBP21.82■■□□□ 1.08
HDAC4-217ENST00000553145 FERMT2Q96AC1 680 aa21.82■■□□□ 1.08
HDAC4-217ENST00000553145 MRPL11Q9Y3B7 192 aaKnown RBP21.82■■□□□ 1.08
HDAC4-217ENST00000553145 PLEKHA8P1O95397 391 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 EDNRBP24530 442 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 KRT32Q14532 448 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 TMEM63BQ5T3F8 832 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 DHX32Q7L7V1 743 aaKnown RBP21.81■■□□□ 1.08
HDAC4-217ENST00000553145 RNF180Q86T96 592 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 SGMS1Q86VZ5 419 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 SYTL5Q8TDW5 730 aaPredicted RBP21.81■■□□□ 1.08
HDAC4-217ENST00000553145 PIBF1Q8WXW3 757 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 PCDH10Q9P2E7 1040 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 PHF24Q9UPV7 400 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 PCDHA1Q9Y5I3 950 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 SNX14Q9Y5W7 946 aa21.81■■□□□ 1.08
HDAC4-217ENST00000553145 BAZ2BQ9UIF8 2168 aaKnown RBP21.81■■□□□ 1.08
HDAC4-217ENST00000553145 LOC102724159A0A0B4J2E5 919 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 REC8O95072 547 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 CPA1P15085 419 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 KIF5BP33176 963 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 TNFAIP2Q03169 654 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 PWP2Q15269 919 aaKnown RBP21.8■■□□□ 1.08
HDAC4-217ENST00000553145 MCF2L2Q86YR7 1114 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 CMTR1Q8N1G2 835 aaKnown RBP21.8■■□□□ 1.08
HDAC4-217ENST00000553145 KLHDC9Q8NEP7 349 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 DNERQ8NFT8 737 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 SPZ1Q9BXG8 430 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 UPF3AQ9H1J1 476 aaKnown RBP21.8■■□□□ 1.08
HDAC4-217ENST00000553145 VTA1Q9NP79 307 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 ZMYND8Q9ULU4 1186 aaPredicted RBP21.8■■□□□ 1.08
HDAC4-217ENST00000553145 SLC12A7Q9Y666 1083 aa21.8■■□□□ 1.08
HDAC4-217ENST00000553145 PNMA6FA0A0J9YX94 578 aa21.79■■□□□ 1.08
HDAC4-217ENST00000553145 CTAGE5O15320 804 aa21.79■■□□□ 1.08
HDAC4-217ENST00000553145 SMPD1P17405 629 aa21.79■■□□□ 1.08
HDAC4-217ENST00000553145 GJA9P57773 515 aa21.79■■□□□ 1.08
HDAC4-217ENST00000553145 CCSAPQ6IQ19 270 aaPredicted RBP21.79■■□□□ 1.08
HDAC4-217ENST00000553145 SLC39A5Q6ZMH5 540 aa21.79■■□□□ 1.08
HDAC4-217ENST00000553145 SRBD1Q8N5C6 995 aaKnown RBP21.79■■□□□ 1.08
HDAC4-217ENST00000553145 TAAR1Q96RJ0 339 aa21.79■■□□□ 1.08
HDAC4-217ENST00000553145 MAF1Q9H063 256 aa21.79■■□□□ 1.08
HDAC4-217ENST00000553145 GNEQ9Y223 722 aaKnown RBP21.79■■□□□ 1.08
HDAC4-217ENST00000553145 CFBP00751 764 aa21.78■■□□□ 1.08
HDAC4-217ENST00000553145 C6orf222P0C671 652 aaPredicted RBP21.78■■□□□ 1.08
HDAC4-217ENST00000553145 CALM1P0DP23 149 aa21.78■■□□□ 1.08
HDAC4-217ENST00000553145 CALM2P0DP24 149 aa21.78■■□□□ 1.08
HDAC4-217ENST00000553145 CALM3P0DP25 149 aa21.78■■□□□ 1.08
HDAC4-217ENST00000553145 CST5P28325 142 aaPredicted RBP21.78■■□□□ 1.08
HDAC4-217ENST00000553145 HSD17B4P51659 736 aa21.78■■□□□ 1.08
HDAC4-217ENST00000553145 GHRHRQ02643 423 aa21.78■■□□□ 1.08
HDAC4-217ENST00000553145 APOA5Q6Q788 366 aa21.78■■□□□ 1.08
HDAC4-217ENST00000553145 MICU3Q86XE3 530 aa21.78■■□□□ 1.08
HDAC4-217ENST00000553145 JAKMIP1Q96N16 626 aaKnown RBP21.78■■□□□ 1.08
HDAC4-217ENST00000553145 BRPF3Q9ULD4 1205 aa21.78■■□□□ 1.08
HDAC4-217ENST00000553145 COLQQ9Y215 455 aaPredicted RBP21.78■■□□□ 1.08
HDAC4-217ENST00000553145 A0A1W2PQ45 241 aaPredicted RBP21.77■■□□□ 1.08
HDAC4-217ENST00000553145 A0A1W2PQY0 241 aa21.77■■□□□ 1.08
HDAC4-217ENST00000553145 SYN1P17600 705 aa21.77■■□□□ 1.08
HDAC4-217ENST00000553145 ACLYP53396 1101 aa21.77■■□□□ 1.08
HDAC4-217ENST00000553145 RTP1P59025 263 aa21.77■■□□□ 1.08
HDAC4-217ENST00000553145 PDE4DQ08499 809 aa21.77■■□□□ 1.08
HDAC4-217ENST00000553145 SNX17Q15036 470 aa21.77■■□□□ 1.08
HDAC4-217ENST00000553145 KCNA10Q16322 511 aa21.77■■□□□ 1.08
HDAC4-217ENST00000553145 CHRDL2Q6WN34 429 aa21.77■■□□□ 1.08
HDAC4-217ENST00000553145 FANCBQ8NB91 859 aa21.77■■□□□ 1.08
HDAC4-217ENST00000553145 TSEN34Q9BSV6 310 aaKnown RBP21.77■■□□□ 1.08
HDAC4-217ENST00000553145 CEP290O15078 2479 aa21.77■■□□□ 1.07
HDAC4-217ENST00000553145 HMGB1P09429 215 aaKnown RBP21.76■■□□□ 1.07
HDAC4-217ENST00000553145 SMARCA1P28370 1054 aa21.76■■□□□ 1.07
HDAC4-217ENST00000553145 GNAQP50148 359 aa21.76■■□□□ 1.07
HDAC4-217ENST00000553145 NKX3-2P78367 333 aa21.76■■□□□ 1.07
HDAC4-217ENST00000553145 IQSEC1Q6DN90 963 aa21.76■■□□□ 1.07
HDAC4-217ENST00000553145 NOL8Q76FK4 1167 aaKnown RBP21.76■■□□□ 1.07
HDAC4-217ENST00000553145 TLK2Q86UE8 772 aa21.76■■□□□ 1.07
HDAC4-217ENST00000553145 RBM47A0AV96 593 aaKnown RBP21.75■■□□□ 1.07
HDAC4-217ENST00000553145 HOXA13P31271 388 aaPredicted RBP21.75■■□□□ 1.07
HDAC4-217ENST00000553145 BEX3Q00994 111 aa21.75■■□□□ 1.07
HDAC4-217ENST00000553145 TRIM60Q495X7 471 aa21.75■■□□□ 1.07
HDAC4-217ENST00000553145 TMTC3Q6ZXV5 915 aa21.75■■□□□ 1.07
HDAC4-217ENST00000553145 RRP36Q96EU6 259 aaKnown RBP21.75■■□□□ 1.07
HDAC4-217ENST00000553145 RMDN3Q96TC7 470 aa21.75■■□□□ 1.07
HDAC4-217ENST00000553145 LZTS2Q9BRK4 669 aa21.75■■□□□ 1.07
HDAC4-217ENST00000553145 USP26Q9BXU7 913 aa21.75■■□□□ 1.07
HDAC4-217ENST00000553145 SPC25Q9HBM1 224 aa21.75■■□□□ 1.07
HDAC4-217ENST00000553145 ATP11BQ9Y2G3 1177 aa21.75■■□□□ 1.07
HDAC4-217ENST00000553145 MOXD2PA6NHM9 499 aa21.74■■□□□ 1.07
HDAC4-217ENST00000553145 EPB41L2O43491 1005 aaKnown RBP21.74■■□□□ 1.07
HDAC4-217ENST00000553145 ASGR1P07306 291 aa21.74■■□□□ 1.07
HDAC4-217ENST00000553145 EIF2AK2P19525 551 aaKnown RBP21.74■■□□□ 1.07
HDAC4-217ENST00000553145 GNASQ5JWF2 1037 aa21.74■■□□□ 1.07
HDAC4-217ENST00000553145 NSUN6Q8TEA1 469 aaKnown RBP21.74■■□□□ 1.07
HDAC4-217ENST00000553145 MPHOSPH6Q99547 160 aaKnown RBP21.74■■□□□ 1.07
HDAC4-217ENST00000553145 WDR11Q9BZH6 1224 aa21.74■■□□□ 1.07
HDAC4-217ENST00000553145 PRO3102Q9H379 93 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms