RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 ARVCFO00192 962 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 DYNC1LI2O43237 492 aaPredicted RBP16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 PTGS1P23219 599 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 MCM5P33992 734 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 NOVP48745 357 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 BAATQ14032 418 aaPredicted RBP16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 SART3Q15020 963 aaKnown RBP16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 TLK2Q86UE8 772 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 TBC1D10CQ8IV04 446 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 FBXO16Q8IX29 292 aaPredicted RBP16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 RANBP17Q9H2T7 1088 aaKnown RBP16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 PDGFCQ9NRA1 345 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 TCP11L1Q9NUJ3 509 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 DNAH12Q6ZR08 3092 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 ASTN1O14525 1302 aa16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 MROH7Q68CQ1 1323 aa16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 FRMPD3Q5JV73 1810 aa16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 ERICH2A1L162 156 aa16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 ST18O60284 1047 aa16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 TIMP1P01033 207 aa16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 SMPD1P17405 629 aa16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 SMAD3P84022 425 aaKnown RBP16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 CXCL17Q6UXB2 119 aa16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 ZKSCAN3Q9BRR0 538 aa16.2■□□□□ 0.18
SMARCC2-212ENST00000552566 NFIBO00712 420 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 CTAGE5O15320 804 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 TLR3O15455 904 aaKnown RBP16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 PDHBP11177 359 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 CALML3P27482 149 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 CDK7P50613 346 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 NEK4P51957 841 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 FSCN1Q16658 493 aaKnown RBP16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 ADCK5Q3MIX3 580 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 TMEM63BQ5T3F8 832 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 BTNL9Q6UXG8 535 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 RUFY3Q7L099 469 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 DHX32Q7L7V1 743 aaKnown RBP16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 IQCA1Q86XH1 822 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 CDX2Q99626 313 aaPredicted RBP16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 PPP1R12CQ9BZL4 782 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 SEMA6BQ9H3T3 888 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 ZSWIM6Q9HCJ5 1215 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 TBX21Q9UL17 535 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 GNEQ9Y223 722 aaKnown RBP16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 NEDD4P46934 1319 aa16.19■□□□□ 0.18
SMARCC2-212ENST00000552566 COL11A1P12107 1806 aaPredicted RBP16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 PARP14Q460N5 1801 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 B4E1Z4 1266 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 ZEB2O60315 1214 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 KDM4AO75164 1064 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 ANP32AP39687 249 aaKnown RBP16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 ZNF543Q08ER8 600 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 IQSEC1Q6DN90 963 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 MFSD5Q6N075 450 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 TAPT1Q6NXT6 567 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 IL17RAQ96F46 866 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 TTC14Q96N46 770 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 UBAC1Q9BSL1 405 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 PDRG1Q9NUG6 133 aa16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 ADD3Q9UEY8 706 aaKnown RBP16.18■□□□□ 0.18
SMARCC2-212ENST00000552566 CABYRO75952 493 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 GOLGA8HP0CJ92 632 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 RPS6KB1P23443 525 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 ANKRD1Q15327 319 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 SLC30A10Q6XR72 485 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 STOX1Q6ZVD7 989 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 FAM126BQ8IXS8 530 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 TMEM199Q8N511 208 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 UPF3BQ9BZI7 483 aaKnown RBP16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 VTA1Q9NP79 307 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 TAF6LQ9Y6J9 622 aa16.17■□□□□ 0.18
SMARCC2-212ENST00000552566 PRC1O43663 620 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 ACRP10323 421 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 CSF2RAP15509 400 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 PSMC6P62333 389 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 NKX3-2P78367 333 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 PPIGQ13427 754 aaKnown RBP eCLIP16.16■□□□□ 0.181e-9■□□□□ 10.8
SMARCC2-212ENST00000552566 ITGA7Q13683 1181 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 RNF207Q6ZRF8 634 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 CLEC4DQ8WXI8 215 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 MYLIPQ8WY64 445 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 TMEM87BQ96K49 555 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.16■□□□□ 0.185e-7■■□□□ 11.8
SMARCC2-212ENST00000552566 MTA3Q9BTC8 594 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 UBA5Q9GZZ9 404 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 TTYH1Q9H313 450 aaPredicted RBP16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 CPVLQ9H3G5 476 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 TSHZ2Q9NRE2 1034 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 ZSWIM5Q9P217 1185 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 WDR19Q8NEZ3 1342 aa16.16■□□□□ 0.18
SMARCC2-212ENST00000552566 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 IFIT3O14879 490 aaKnown RBP16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 CYP2C18P33260 490 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 MCM2P49736 904 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 PDE4DQ08499 809 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 USH1GQ495M9 461 aa16.15■□□□□ 0.18
SMARCC2-212ENST00000552566 MB21D2Q8IYB1 491 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms