RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 SPDYE3A6NKU9 549 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 POLR2DO15514 142 aaKnown RBP14.39□□□□□ -0.11
CACNB3-223ENST00000552480 ZBED4O75132 1171 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 USP11P51784 963 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 HMGCS2P54868 508 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 STX1AQ16623 288 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 LONRF3Q496Y0 759 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 KANK3Q6NY19 840 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
CACNB3-223ENST00000552480 MOXD1Q6UVY6 613 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 USP49Q70CQ1 688 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 EPSTI1Q96J88 318 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 SLC38A10Q9HBR0 1119 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 KIAA1468Q9P260 1216 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 HOOK1Q9UJC3 728 aaKnown RBP14.39□□□□□ -0.11
CACNB3-223ENST00000552480 CCPG1Q9ULG6 757 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 ZNF536O15090 1300 aa14.39□□□□□ -0.11
CACNB3-223ENST00000552480 RBBP6Q7Z6E9 1792 aaKnown RBP14.38□□□□□ -0.11
CACNB3-223ENST00000552480 CYP3A7-CYP3A51PA0A087WV96 503 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 GCOM1H8Y6P7 765 aaPredicted RBP14.38□□□□□ -0.11
CACNB3-223ENST00000552480 ACTN4O43707 911 aaKnown RBP14.38□□□□□ -0.11
CACNB3-223ENST00000552480 SLC37A4O43826 429 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 TDP2O95551 362 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 POLR2MP0CAP2 368 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 CYP3A7P24462 503 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 SREBF1P36956 1147 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 TXLNAP40222 546 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 CALCRLQ16602 461 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 CRYGNQ8WXF5 182 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 CCDC34Q96HJ3 373 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 AK8Q96MA6 479 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 MBOAT7Q96N66 472 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 MTMR9Q96QG7 549 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 DDX25Q9UHL0 483 aaKnown RBP14.38□□□□□ -0.11
CACNB3-223ENST00000552480 SERTAD1Q9UHV2 236 aa14.38□□□□□ -0.11
CACNB3-223ENST00000552480 CTDP1Q9Y5B0 961 aaPredicted RBP14.38□□□□□ -0.11
CACNB3-223ENST00000552480 LOC285556D6RIA3 1793 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 MYH7BA7E2Y1 1941 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 A0A087X0B3 334 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 CAVIN2O95810 425 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 ARHGAP4P98171 946 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 TMEM266Q2M3C6 531 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 UVSSAQ2YD98 709 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 ANO6Q4KMQ2 910 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 ANKRD13AQ8IZ07 590 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 PDILTQ8N807 584 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 RNF214Q8ND24 703 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 AGBL1Q96MI9 1066 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 P2RX7Q99572 595 aaKnown RBP14.37□□□□□ -0.11
CACNB3-223ENST00000552480 EHMT1Q9H9B1 1298 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 ANO10Q9NW15 660 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 MYPNQ86TC9 1320 aa14.37□□□□□ -0.11
CACNB3-223ENST00000552480 VWA5AO00534 786 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 CFBP00751 764 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 CYP3A4P08684 503 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 SLFN14P0C7P3 912 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 HOXA13P31271 388 aaPredicted RBP14.36□□□□□ -0.11
CACNB3-223ENST00000552480 DSG3P32926 999 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
CACNB3-223ENST00000552480 HSD17B4P51659 736 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 MDM2Q00987 491 aaPredicted RBP14.36□□□□□ -0.11
CACNB3-223ENST00000552480 GHRHRQ02643 423 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 PPATQ06203 517 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 ZRSR1Q15695 479 aaKnown RBP14.36□□□□□ -0.11
CACNB3-223ENST00000552480 E2F4Q16254 413 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 CATSPERGQ6ZRH7 1159 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 ARMC9Q7Z3E5 817 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 ERO1BQ86YB8 467 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 MCF2L2Q86YR7 1114 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 CEP57L1Q8IYX8 460 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 SAMD3Q8N6K7 520 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 FAM200AQ8TCP9 573 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 DHX58Q96C10 678 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 ATG4CQ96DT6 458 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 PANK2Q9BZ23 570 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 CCSER1Q9C0I3 900 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 ELP3Q9H9T3 547 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 RAVER2Q9HCJ3 691 aaKnown RBP14.36□□□□□ -0.11
CACNB3-223ENST00000552480 TUBE1Q9UJT0 475 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 RLFQ13129 1914 aa14.36□□□□□ -0.11
CACNB3-223ENST00000552480 PTPRFP10586 1907 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 CIITAP33076 1130 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 OAZ1P54368 228 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 PNOCQ13519 176 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 TTLL12Q14166 644 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-223ENST00000552480 COG2Q14746 738 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 POSTNQ15063 836 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 Q4G0T1 1027 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 IGSF22Q8N9C0 903 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 IQUBQ8NA54 791 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 REPS2Q8NFH8 660 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 CLEC4DQ8WXI8 215 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 ERCC4Q92889 916 aaPredicted RBP14.35□□□□□ -0.11
CACNB3-223ENST00000552480 RAB34Q9BZG1 259 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 ADAMTS5Q9UNA0 930 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
CACNB3-223ENST00000552480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.34□□□□□ -0.11
CACNB3-223ENST00000552480 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
CACNB3-223ENST00000552480 CXCL11O14625 94 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms