RNA–Protein interactions for RNA: ENST00000552294.1

CTDSP2-208, Transcript of CTD small phosphatase 2, humanhuman

TSL 5

Gene CTDSP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-208ENST00000552294 NBNO60934 754 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 IQCF3P0C7M6 154 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 SLC16A2P36021 539 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 ZNF200P98182 395 aaPredicted RBP8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 BAATQ14032 418 aaPredicted RBP8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 UBE3CQ15386 1083 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 SBK1Q52WX2 424 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 C20orf194Q5TEA3 1177 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 FAM117BQ6P1L5 589 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 SLC30A10Q6XR72 485 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 KIAA1211Q6ZU35 1233 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 FAM178BQ8IXR5 827 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 PIP4P2Q8N4L2 257 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 CHST13Q8NET6 341 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 MORC4Q8TE76 937 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 TBC1D5Q92609 795 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 HLA-CQ95604 372 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 CPVLQ9H3G5 476 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 MTMR7Q9Y216 660 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 BRWD1Q9NSI6 2320 aa8.12□□□□□ -1.11
CTDSP2-208ENST00000552294 MYH8P13535 1937 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 LINC01553A4QN01 128 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 H3BQ06 376 aaPredicted RBP8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 IFIT2P09913 472 aaKnown RBP8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 BMP3P12645 472 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 MRE11P49959 708 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 WDR5P61964 334 aaKnown RBP8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 NHLH1Q02575 133 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 GDF6Q6KF10 455 aaPredicted RBP8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 NSMFQ6X4W1 530 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 IL27Q8NEV9 243 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 OTUD7AQ8TE49 926 aaPredicted RBP8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 CLEC4DQ8WXI8 215 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 KAT2BQ92831 832 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 FBXL18Q96ME1 805 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 C17orf80Q9BSJ5 609 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 UBE2ZQ9H832 354 aaPredicted RBP8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 ACAD9Q9H845 621 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 SPC25Q9HBM1 224 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 PRR12Q9ULL5 1215 aa8.11□□□□□ -1.11
CTDSP2-208ENST00000552294 VPS13AQ96RL7 3174 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 RBM47A0AV96 593 aaKnown RBP8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 LGR5O75473 907 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 KCNA5P22460 613 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 COPB2P35606 906 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 CHMP4BP1P59074 171 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 TFAP4Q01664 338 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 CTDSPL2Q05D32 466 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 DUSP28Q4G0W2 176 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 FAM47CQ5HY64 1035 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 GMCL1P1Q8NEA9 526 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 WDR11Q9BZH6 1224 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 AP5M1Q9H0R1 490 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 BCAS3Q9H6U6 928 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 MKNK2Q9HBH9 465 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 ALG13Q9NP73 1137 aaKnown RBP8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 ZBTB40Q9NUA8 1239 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 FEM1BQ9UK73 627 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 COG6Q9Y2V7 657 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 TELO2Q9Y4R8 837 aa8.1□□□□□ -1.11
CTDSP2-208ENST00000552294 DCHS1Q96JQ0 3298 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 GPAA1O43292 621 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 CABYRO75952 493 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 ALDH5A1P51649 535 aaPredicted RBP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 DLX2Q07687 328 aaPredicted RBP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 MKRN4PQ13434 485 aaPredicted RBP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 TRIM71Q2Q1W2 868 aaKnown RBP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 IER5LQ5T953 404 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 VPS53Q5VIR6 699 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 IQSEC1Q6DN90 963 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 ERC1Q8IUD2 1116 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 FTSJ3Q8IY81 847 aaKnown RBP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 RPUSD2Q8IZ73 545 aaKnown RBP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 IFNL3Q8IZI9 196 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 GJD3Q8N144 294 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 CLASRPQ8N2M8 674 aaKnown RBP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 STAG1Q8WVM7 1258 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 KIF1BPQ96EK5 621 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 FTOQ9C0B1 505 aaKnown RBP eCLIP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 COL20A1Q9P218 1284 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 ARPP21Q9UBL0 812 aaPredicted RBP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 COG5Q9UP83 839 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 HCN4Q9Y3Q4 1203 aa8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 ARIH1Q9Y4X5 557 aaPredicted RBP8.09□□□□□ -1.11
CTDSP2-208ENST00000552294 FRMPD2Q68DX3 1309 aaPredicted RBP8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 MYH4Q9Y623 1939 aa8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 POTEB3A0JP26 581 aa8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 GTPBP6O43824 516 aaPredicted RBP8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 SORBS3O60504 671 aa8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 TTLL1O95922 423 aa8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 ARP10275 920 aa8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 CALML3P27482 149 aa8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 GTF2F1P35269 517 aaKnown RBP eCLIP8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 LTBRP36941 435 aa8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 OAZ1P54368 228 aa8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 TMED8Q6PL24 325 aaPredicted RBP8.08□□□□□ -1.12
CTDSP2-208ENST00000552294 POTEBQ6S5H4 581 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms