RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 PDHXO00330 501 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 MUM1L1Q5H9M0 696 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 NLRX1Q86UT6 975 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 TRMT44Q8IYL2 757 aaKnown RBP9.22□□□□□ -0.93
CHPT1-208ENST00000552215 VPS33BQ9H267 617 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 KIAA1024Q9UPX6 916 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 RIPK3Q9Y572 518 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 UBR3Q6ZT12 1888 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 FOXN1O15353 648 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 CCDC183Q5T5S1 534 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 NELFCDQ8IXH7 590 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 CPLX3Q8WVH0 158 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 ZNF577Q9BSK1 485 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 TMEM60Q9H2L4 133 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 USP25Q9UHP3 1055 aa9.22□□□□□ -0.93
CHPT1-208ENST00000552215 SERPINC1P01008 464 aa9.21□□□□□ -0.93
CHPT1-208ENST00000552215 ARHGAP4P98171 946 aa9.21□□□□□ -0.93
CHPT1-208ENST00000552215 ANO6Q4KMQ2 910 aa9.21□□□□□ -0.93
CHPT1-208ENST00000552215 METTL13Q8N6R0 699 aa9.21□□□□□ -0.93
CHPT1-208ENST00000552215 EHD4Q9H223 541 aa9.21□□□□□ -0.93
CHPT1-208ENST00000552215 CNTNAP1P78357 1384 aa9.21□□□□□ -0.93
CHPT1-208ENST00000552215 WNT7AO00755 349 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 LRCH2Q5VUJ6 765 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 CABP7Q86V35 215 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 FAM160B2Q86V87 743 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 SMARCE1Q969G3 411 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 FAM212AQ96EL1 285 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 ASCC2Q9H1I8 757 aaPredicted RBP9.21□□□□□ -0.94
CHPT1-208ENST00000552215 RGL1Q9NZL6 768 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 AOC2O75106 756 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 FKBP1AP62942 108 aaKnown RBP9.21□□□□□ -0.94
CHPT1-208ENST00000552215 LUZP1Q86V48 1076 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 LINC00301Q8NCQ3 95 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 BANK1Q8NDB2 785 aa9.21□□□□□ -0.94
CHPT1-208ENST00000552215 N4BP2Q86UW6 1770 aaPredicted RBP9.21□□□□□ -0.94
CHPT1-208ENST00000552215 C4AP0C0L4 1744 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 TNPO2O14787 897 aaKnown RBP9.2□□□□□ -0.94
CHPT1-208ENST00000552215 WDR46O15213 610 aaKnown RBP9.2□□□□□ -0.94
CHPT1-208ENST00000552215 CSPG5O95196 566 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 OR52Z1P0C646 297 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 TPM4P67936 248 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 GJC2Q5T442 439 aaPredicted RBP9.2□□□□□ -0.94
CHPT1-208ENST00000552215 RDH13Q8NBN7 331 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 TEPSINQ96N21 525 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 CCDC169A6NNP5 214 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 PTGS1P23219 599 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 LRRC41Q15345 812 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 TCERG1LQ5VWI1 586 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 SIAH1Q8IUQ4 282 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 DHX37Q8IY37 1157 aaKnown RBP9.2□□□□□ -0.94
CHPT1-208ENST00000552215 ZNF165P49910 485 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 PRAMEF19Q5SWL8 479 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 TATDN1Q6P1N9 297 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 MIER3Q7Z3K6 550 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 HPS3Q969F9 1004 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 TCHPQ9BT92 498 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 TEX13BQ9BXU2 312 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 MYO9BQ13459 2157 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 CEP290O15078 2479 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 PAPPAQ13219 1627 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 MYH3P11055 1940 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 NUP188Q5SRE5 1749 aa9.2□□□□□ -0.94
CHPT1-208ENST00000552215 CDR1P51861 262 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 HERVK_113P62684 666 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 KLHL40Q2TBA0 621 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 MRIQ9BWK5 157 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 FOXP1Q9H334 677 aaPredicted RBP9.19□□□□□ -0.94
CHPT1-208ENST00000552215 SYCP3Q8IZU3 236 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 CHD4Q14839 1912 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 PPP1R11O60927 126 aaPredicted RBP9.19□□□□□ -0.94
CHPT1-208ENST00000552215 SLC35G1Q2M3R5 365 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 LONRF3Q496Y0 759 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 ERMNQ8TAM6 284 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 MMP19Q99542 508 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 SPZ1Q9BXG8 430 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 SLC37A4O43826 429 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 TRAF1Q13077 416 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 SLC39A14Q15043 492 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 FASTKD5Q7L8L6 764 aaKnown RBP9.19□□□□□ -0.94
CHPT1-208ENST00000552215 MCF2L2Q86YR7 1114 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 AOPEPQ8N6M6 819 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 BICD1Q96G01 975 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 GOLPH3LQ9H4A5 285 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 TRPC6Q9Y210 931 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 SNCAIPQ9Y6H5 919 aa9.19□□□□□ -0.94
CHPT1-208ENST00000552215 VWA5AO00534 786 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 TBCAO75347 108 aaKnown RBP9.18□□□□□ -0.94
CHPT1-208ENST00000552215 MCM6Q14566 821 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 IQUBQ8NA54 791 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 PHF20Q9BVI0 1012 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 WDR11Q9BZH6 1224 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 ACAD9Q9H845 621 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 DDX19AQ9NUU7 478 aaKnown RBP9.18□□□□□ -0.94
CHPT1-208ENST00000552215 PPP1R9AQ9ULJ8 1098 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 POTEFA5A3E0 1075 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 C19orf81C9J6K1 198 aa9.18□□□□□ -0.94
CHPT1-208ENST00000552215 USO1O60763 962 aaKnown RBP9.18□□□□□ -0.94
CHPT1-208ENST00000552215 FCER1AP12319 257 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms