RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 TMTC2Q8N394 836 aa15.66■□□□□ 0.1
CR383656.13-201ENST00000550928 PCSK9Q8NBP7 692 aaKnown RBP15.66■□□□□ 0.1
CR383656.13-201ENST00000550928 DNERQ8NFT8 737 aa15.66■□□□□ 0.1
CR383656.13-201ENST00000550928 VTA1Q9NP79 307 aa15.66■□□□□ 0.1
CR383656.13-201ENST00000550928 GNEQ9Y223 722 aaKnown RBP15.66■□□□□ 0.1
CR383656.13-201ENST00000550928 MRPL11Q9Y3B7 192 aaKnown RBP15.66■□□□□ 0.1
CR383656.13-201ENST00000550928 LCTP09848 1927 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 A0A1W2PPC1 479 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 A0A1W2PQ45 241 aaPredicted RBP15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 A0A1W2PQY0 241 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 MYADML2A6NDP7 307 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 MOXD2PA6NHM9 499 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 CTAGE5O15320 804 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 PRC1O43663 620 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 CDC45O75419 566 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 NEFLP07196 543 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 C6orf222P0C671 652 aaPredicted RBP15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 SMPD1P17405 629 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 MCM5P33992 734 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 MAGEA10P43363 369 aaPredicted RBP15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 FXR1P51114 621 aaKnown RBP eCLIP15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 GNASQ5JWF2 1037 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 NOL8Q76FK4 1167 aaKnown RBP15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 CATIPQ7Z7H3 387 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 MCF2L2Q86YR7 1114 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 AMNQ9BXJ7 453 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 RIOX1Q9H6W3 641 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 LY9Q9HBG7 655 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 GPHNQ9NQX3 736 aaPredicted RBP15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 Q9Y3F1 56 aa15.65■□□□□ 0.1
CR383656.13-201ENST00000550928 RBM47A0AV96 593 aaKnown RBP15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 B4DLN1 442 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 ZBTB5O15062 677 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 DYNC1LI2O43237 492 aaPredicted RBP15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 ASGR1P07306 291 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 MRPL12P52815 198 aaKnown RBP15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 TLE2Q04725 743 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 SLC35G1Q2M3R5 365 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 TRIM60Q495X7 471 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 TMEM63BQ5T3F8 832 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 FBXO16Q8IX29 292 aaPredicted RBP15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 TMEM87BQ96K49 555 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 TAAR1Q96RJ0 339 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 MPHOSPH6Q99547 160 aaKnown RBP15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 MAP3K14Q99558 947 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 AP5M1Q9H0R1 490 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 MYH6P13533 1939 aa15.64■□□□□ 0.09
CR383656.13-201ENST00000550928 CYTH3O43739 400 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 PPP1R11O60927 126 aaPredicted RBP15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 EDNRBP24530 442 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 LIFRP42702 1097 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 PDE4DQ08499 809 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 COL9A3Q14050 684 aaPredicted RBP15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 TSGA10IPQ3SY00 556 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 RNF20Q5VTR2 975 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 SYTL5Q8TDW5 730 aaPredicted RBP15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 PIGSQ96S52 555 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 WDR11Q9BZH6 1224 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 STARD7Q9NQZ5 370 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 PRKAG2Q9UGJ0 569 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 PCDHA1Q9Y5I3 950 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 DNAH12Q6ZR08 3092 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 ELP1O95163 1332 aa15.63■□□□□ 0.09
CR383656.13-201ENST00000550928 SH2B2O14492 632 aaPredicted RBP15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 MDM2Q00987 491 aaPredicted RBP15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 BEX3Q00994 111 aa15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 TRAF1Q13077 416 aa15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 DUSP28Q4G0W2 176 aa15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 ZNF654Q8IZM8 581 aa15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 VTI1AQ96AJ9 217 aa15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 GLT1D1Q96MS3 346 aa15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 TOX2Q96NM4 488 aa15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 UBE2OQ9C0C9 1292 aaKnown RBP15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 MAP3K20Q9NYL2 800 aaKnown RBP15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 PCDH10Q9P2E7 1040 aa15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 BAZ2BQ9UIF8 2168 aaKnown RBP15.62■□□□□ 0.09
CR383656.13-201ENST00000550928 PNMA6FA0A0J9YX94 578 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 CCDC69A6NI79 296 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 OPLAHO14841 1288 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 DDAH1O94760 285 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 CFBP00751 764 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 PTGS1P23219 599 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 SMARCA1P28370 1054 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 CDK7P50613 346 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 GHRHRQ02643 423 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 NFXL1Q6ZNB6 911 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 SH3RF1Q7Z6J0 888 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 TLK2Q86UE8 772 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 HOMER1Q86YM7 354 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 SAMD3Q8N6K7 520 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 NSUN6Q8TEA1 469 aaKnown RBP15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 NEK1Q96PY6 1258 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 IWS1Q96ST2 819 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 LBHD1Q9BQE6 289 aaPredicted RBP15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 COL20A1Q9P218 1284 aa15.61■□□□□ 0.09
CR383656.13-201ENST00000550928 TRIM43BA6NCK2 446 aa15.6■□□□□ 0.09
CR383656.13-201ENST00000550928 KIF5BP33176 963 aa15.6■□□□□ 0.09
CR383656.13-201ENST00000550928 HSD17B4P51659 736 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms