RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 IQCEQ6IPM2 695 aa8.18□□□□□ -1.1
LETMD1-226ENST00000550755 ATG14Q6ZNE5 492 aa8.18□□□□□ -1.1
LETMD1-226ENST00000550755 LZTR1Q8N653 840 aa8.18□□□□□ -1.1
LETMD1-226ENST00000550755 USP33Q8TEY7 942 aa8.18□□□□□ -1.1
LETMD1-226ENST00000550755 MYOCOSA0A1B0GUC4 107 aa8.17□□□□□ -1.1
LETMD1-226ENST00000550755 DBX1A6NMT0 343 aa8.17□□□□□ -1.1
LETMD1-226ENST00000550755 THBDP07204 575 aa8.17□□□□□ -1.1
LETMD1-226ENST00000550755 C1QTNF9P0C862 333 aa8.17□□□□□ -1.1
LETMD1-226ENST00000550755 ECI1P42126 302 aa8.17□□□□□ -1.1
LETMD1-226ENST00000550755 YBX1P67809 324 aaKnown RBP8.17□□□□□ -1.1
LETMD1-226ENST00000550755 DLG4P78352 724 aa8.17□□□□□ -1.1
LETMD1-226ENST00000550755 NBPF6Q5VWK0 638 aa8.17□□□□□ -1.1
LETMD1-226ENST00000550755 NBPF4Q96M43 638 aa8.17□□□□□ -1.1
LETMD1-226ENST00000550755 MMP19Q99542 508 aa8.17□□□□□ -1.1
LETMD1-226ENST00000550755 DBR1Q9UK59 544 aaKnown RBP8.17□□□□□ -1.1
LETMD1-226ENST00000550755 CYBBP04839 570 aa8.16□□□□□ -1.1
LETMD1-226ENST00000550755 MED14OSP0DP75 135 aa8.16□□□□□ -1.1
LETMD1-226ENST00000550755 VIPR1P32241 457 aa8.16□□□□□ -1.1
LETMD1-226ENST00000550755 PAQR3Q6TCH7 311 aa8.16□□□□□ -1.1
LETMD1-226ENST00000550755 ST13P5Q8NFI4 369 aaPredicted RBP8.16□□□□□ -1.1
LETMD1-226ENST00000550755 ARMC5Q96C12 935 aa8.16□□□□□ -1.1
LETMD1-226ENST00000550755 KLHL14Q9P2G3 628 aa8.16□□□□□ -1.1
LETMD1-226ENST00000550755 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
LETMD1-226ENST00000550755 SRGAP3O43295 1099 aa8.15□□□□□ -1.1
LETMD1-226ENST00000550755 TBX1O43435 398 aa8.15□□□□□ -1.1
LETMD1-226ENST00000550755 CBX2Q14781 532 aaPredicted RBP8.15□□□□□ -1.1
LETMD1-226ENST00000550755 E4F1Q66K89 784 aaPredicted RBP8.15□□□□□ -1.1
LETMD1-226ENST00000550755 ZC3H14Q6PJT7 736 aaKnown RBP8.15□□□□□ -1.1
LETMD1-226ENST00000550755 RPTNQ6XPR3 784 aa8.15□□□□□ -1.1
LETMD1-226ENST00000550755 TMC6Q7Z403 805 aa8.15□□□□□ -1.1
LETMD1-226ENST00000550755 SGSM3Q96HU1 749 aa8.15□□□□□ -1.1
LETMD1-226ENST00000550755 TOX2Q96NM4 488 aa8.15□□□□□ -1.1
LETMD1-226ENST00000550755 KRTAP4-12Q9BQ66 201 aa8.15□□□□□ -1.1
LETMD1-226ENST00000550755 GULP1Q9UBP9 304 aa8.15□□□□□ -1.1
LETMD1-226ENST00000550755 RWDD3Q9Y3V2 267 aa8.15□□□□□ -1.1
LETMD1-226ENST00000550755 C7orf72A4D263 438 aa8.14□□□□□ -1.11
LETMD1-226ENST00000550755 MEFVO15553 781 aaPredicted RBP8.14□□□□□ -1.11
LETMD1-226ENST00000550755 MYO1BO43795 1136 aa8.14□□□□□ -1.11
LETMD1-226ENST00000550755 DBHP09172 617 aa8.14□□□□□ -1.11
LETMD1-226ENST00000550755 MAPKAPK2P49137 400 aa8.14□□□□□ -1.11
LETMD1-226ENST00000550755 PPP2R2AP63151 447 aa8.14□□□□□ -1.11
LETMD1-226ENST00000550755 HSP90AA2PQ14568 343 aaPredicted RBP8.14□□□□□ -1.11
LETMD1-226ENST00000550755 FRS2Q8WU20 508 aa8.14□□□□□ -1.11
LETMD1-226ENST00000550755 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.14□□□□□ -1.113e-9■■□□□ 11.5
LETMD1-226ENST00000550755 NUDT5Q9UKK9 219 aa8.14□□□□□ -1.11
LETMD1-226ENST00000550755 KRTAP9-6A0A140TA67 174 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 SCG5P05408 212 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 KCNAB2Q13303 367 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 KCNA10Q16322 511 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 SOGA3Q5TF21 947 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
LETMD1-226ENST00000550755 NPLOC4Q8TAT6 608 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 KCTD13Q8WZ19 329 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 DIO2Q92813 273 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 SGPP1Q9BX95 441 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 SIRPGQ9P1W8 387 aa8.13□□□□□ -1.11
LETMD1-226ENST00000550755 MBD1Q9UIS9 605 aaPredicted RBP8.13□□□□□ -1.11
LETMD1-226ENST00000550755 SMG5Q9UPR3 1016 aaKnown RBP8.13□□□□□ -1.11
LETMD1-226ENST00000550755 A0A1W2PQU0 124 aa8.12□□□□□ -1.11
LETMD1-226ENST00000550755 CCDC85CA6NKD9 419 aa8.12□□□□□ -1.11
LETMD1-226ENST00000550755 NPIPB6E9PJ23 425 aa8.12□□□□□ -1.11
LETMD1-226ENST00000550755 F8W031 263 aaPredicted RBP8.12□□□□□ -1.11
LETMD1-226ENST00000550755 FUCA1P04066 466 aa8.12□□□□□ -1.11
LETMD1-226ENST00000550755 GFRA1P56159 465 aa8.12□□□□□ -1.11
LETMD1-226ENST00000550755 PLEKHN1Q494U1 663 aaPredicted RBP8.12□□□□□ -1.11
LETMD1-226ENST00000550755 KRTAP19-1Q8IUB9 90 aa8.12□□□□□ -1.11
LETMD1-226ENST00000550755 PPIL6Q8IXY8 311 aa8.12□□□□□ -1.11
LETMD1-226ENST00000550755 ZSCAN18Q8TBC5 510 aaPredicted RBP8.12□□□□□ -1.11
LETMD1-226ENST00000550755 CD320Q9NPF0 282 aa8.12□□□□□ -1.11
LETMD1-226ENST00000550755 BTG4Q9NY30 223 aa8.12□□□□□ -1.11
LETMD1-226ENST00000550755 CNOT6Q9ULM6 557 aaKnown RBP8.12□□□□□ -1.11
LETMD1-226ENST00000550755 PDPK1O15530 556 aa8.11□□□□□ -1.11
LETMD1-226ENST00000550755 KRT1P04264 644 aa8.11□□□□□ -1.11
LETMD1-226ENST00000550755 GTF2A2P52657 109 aa8.11□□□□□ -1.11
LETMD1-226ENST00000550755 RPL11P62913 178 aaKnown RBP8.11□□□□□ -1.11
LETMD1-226ENST00000550755 SF1Q15637 639 aaKnown RBP8.11□□□□□ -1.11
LETMD1-226ENST00000550755 CIAPIN1Q6FI81 312 aa8.11□□□□□ -1.11
LETMD1-226ENST00000550755 ZNF669Q96BR6 464 aaPredicted RBP8.11□□□□□ -1.11
LETMD1-226ENST00000550755 AARSD1Q9BTE6 412 aaKnown RBP8.11□□□□□ -1.11
LETMD1-226ENST00000550755 CNTD2Q9H8S5 307 aa8.11□□□□□ -1.11
LETMD1-226ENST00000550755 MARCH2Q9P0N8 246 aa8.11□□□□□ -1.11
LETMD1-226ENST00000550755 TIMM13Q9Y5L4 95 aaPredicted RBP8.11□□□□□ -1.11
LETMD1-226ENST00000550755 IRAK3Q9Y616 596 aa8.11□□□□□ -1.11
LETMD1-226ENST00000550755 ZC3H12DA2A288 527 aaKnown RBP8.1□□□□□ -1.11
LETMD1-226ENST00000550755 RFXAPO00287 272 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 N4BP3O15049 544 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 GLI4P10075 376 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 LTBRP36941 435 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 PRSS53Q2L4Q9 553 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 MTERF2Q49AM1 385 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 ACBD5Q5T8D3 534 aaPredicted RBP8.1□□□□□ -1.11
LETMD1-226ENST00000550755 TMEM145Q8NBT3 493 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 NETO2Q8NC67 525 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 PEX11GQ96HA9 241 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 MTA3Q9BTC8 594 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 IER2Q9BTL4 223 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 CCDC113Q9H0I3 377 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 GCM1Q9NP62 436 aa8.1□□□□□ -1.11
LETMD1-226ENST00000550755 GRIA2P42262 883 aa8.09□□□□□ -1.11
LETMD1-226ENST00000550755 LINC00310P59036 64 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms