RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 JUNBP17275 347 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-213ENST00000550629 ERCC3P19447 782 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 ITPK1Q13572 414 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 MAP3K11Q16584 847 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 CYP27C1Q4G0S4 372 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-213ENST00000550629 NFXL1Q6ZNB6 911 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 UBE3DQ7Z6J8 389 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 DNAJC10Q8IXB1 793 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 TSPYL6Q8N831 410 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 STK31Q9BXU1 1019 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 PICK1Q9NRD5 415 aa7.31□□□□□ -1.24
SCAF11-213ENST00000550629 COL5A3P25940 1745 aaPredicted RBP7.3□□□□□ -1.24
SCAF11-213ENST00000550629 IL6STP40189 918 aaPredicted RBP7.3□□□□□ -1.24
SCAF11-213ENST00000550629 CRKLP46109 303 aaKnown RBP7.3□□□□□ -1.24
SCAF11-213ENST00000550629 RPS26P62854 115 aaKnown RBP7.3□□□□□ -1.24
SCAF11-213ENST00000550629 KRT24Q2M2I5 525 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 ZBTB37Q5TC79 503 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 KRTAP5-3Q6L8H2 238 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 LRFN4Q6PJG9 635 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 LINC00116Q8NCU8 138 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 ELMO3Q96BJ8 720 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 DUSP23Q9BVJ7 150 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 DDX21Q9NR30 783 aaKnown RBP eCLIP7.3□□□□□ -1.24
SCAF11-213ENST00000550629 HYPKQ9NX55 129 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 PCDHB5Q9Y5E4 795 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 USP16Q9Y5T5 823 aa7.3□□□□□ -1.24
SCAF11-213ENST00000550629 A0A087WZG4 1122 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 PRAMEF22A3QJZ6 481 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 ELL2O00472 640 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-213ENST00000550629 FANCGO15287 622 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 ITGB5P18084 799 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 CDK8P49336 464 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 LIG3P49916 1009 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 RARSP54136 660 aaKnown RBP7.29□□□□□ -1.24
SCAF11-213ENST00000550629 TAF1CQ15572 869 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-213ENST00000550629 AGMOQ6ZNB7 445 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 FLAD1Q8NFF5 587 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 PLPPR2Q96GM1 343 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 PAK6Q9NQU5 681 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-213ENST00000550629 C4BP0C0L5 1744 aa7.29□□□□□ -1.24
SCAF11-213ENST00000550629 KIF16BQ96L93 1317 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 SORBS3O60504 671 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 RPS6KA4O75676 772 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 A1BGP04217 495 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 CENPBP07199 599 aaPredicted RBP7.28□□□□□ -1.24
SCAF11-213ENST00000550629 EIF2S2P20042 333 aaKnown RBP7.28□□□□□ -1.24
SCAF11-213ENST00000550629 EIF5P55010 431 aaKnown RBP7.28□□□□□ -1.24
SCAF11-213ENST00000550629 SEPT6Q14141 434 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 EZH2Q15910 746 aaKnown RBP7.28□□□□□ -1.24
SCAF11-213ENST00000550629 CYFIP1Q7L576 1253 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 HDXQ7Z353 690 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 LRP10Q7Z4F1 713 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 DEFB132Q7Z7B7 95 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 NPM2Q86SE8 214 aaKnown RBP7.28□□□□□ -1.24
SCAF11-213ENST00000550629 TOP6BLQ8N6T0 577 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 POU5F2Q8N7G0 328 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 SSH1Q8WYL5 1049 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 ARHGAP45Q92619 1136 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 SMC4Q9NTJ3 1288 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 CHPF2Q9P2E5 772 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 RCAN3Q9UKA8 241 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 TAF1LQ8IZX4 1826 aa7.28□□□□□ -1.24
SCAF11-213ENST00000550629 PTPRCP08575 1304 aa7.27□□□□□ -1.24
SCAF11-213ENST00000550629 PRAMEF27A3QJZ7 478 aa7.27□□□□□ -1.25
SCAF11-213ENST00000550629 IPO8O15397 1037 aaKnown RBP7.27□□□□□ -1.25
SCAF11-213ENST00000550629 DDX58O95786 925 aaKnown RBP7.27□□□□□ -1.25
SCAF11-213ENST00000550629 LMNB1P20700 586 aa7.27□□□□□ -1.25
SCAF11-213ENST00000550629 ST13P50502 369 aaKnown RBP7.27□□□□□ -1.25
SCAF11-213ENST00000550629 WIPI1Q5MNZ9 446 aaPredicted RBP7.27□□□□□ -1.25
SCAF11-213ENST00000550629 CDC37L1Q7L3B6 337 aa7.27□□□□□ -1.25
SCAF11-213ENST00000550629 FAM181AQ8N9Y4 354 aa7.27□□□□□ -1.25
SCAF11-213ENST00000550629 NOC4LQ9BVI4 516 aaKnown RBP7.27□□□□□ -1.25
SCAF11-213ENST00000550629 STK32BQ9NY57 414 aa7.27□□□□□ -1.25
SCAF11-213ENST00000550629 SLC5A6Q9Y289 635 aa7.27□□□□□ -1.25
SCAF11-213ENST00000550629 ZBTB1Q9Y2K1 713 aa7.27□□□□□ -1.25
SCAF11-213ENST00000550629 U3KQE9 123 aa7.27□□□□□ -1.25
SCAF11-213ENST00000550629 NUP188Q5SRE5 1749 aa7.27□□□□□ -1.25
SCAF11-213ENST00000550629 KAT6BQ8WYB5 2073 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 COL15A1P39059 1388 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 IBTKQ9P2D0 1353 aaPredicted RBP7.26□□□□□ -1.25
SCAF11-213ENST00000550629 ERVV-1B6SEH8 477 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 C8AP07357 584 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 TFE3P19532 575 aaPredicted RBP7.26□□□□□ -1.25
SCAF11-213ENST00000550629 CANXP27824 592 aaKnown RBP7.26□□□□□ -1.25
SCAF11-213ENST00000550629 PLCL1Q15111 1095 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 SLC15A2Q16348 729 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 PROSER3Q2NL68 480 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 KIF6Q6ZMV9 814 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 ZNF507Q8TCN5 953 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 TFCP2L1Q9NZI6 479 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 VTI1BQ9UEU0 232 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 TLR6Q9Y2C9 796 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 SNCAIPQ9Y6H5 919 aa7.26□□□□□ -1.25
SCAF11-213ENST00000550629 QSER1Q2KHR3 1735 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 MYL6BP14649 208 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 ZNF827Q17R98 1081 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 CLEC4GQ6UXB4 293 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 COPS6Q7L5N1 327 aa7.25□□□□□ -1.25
SCAF11-213ENST00000550629 STK11IPQ8N1F8 1099 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms