RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 MMS22LQ6ZRQ5 1243 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 CABP7Q86V35 215 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 PLCD3Q8N3E9 789 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
PDE1B-207ENST00000550620 C7orf25Q9BPX7 421 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 TRIM9Q9C026 710 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 TMEM60Q9H2L4 133 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 TSKSQ9UJT2 592 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 PCDHA6Q9UN73 950 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 PCDHA8Q9Y5H6 950 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 CAPN6Q9Y6Q1 641 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 FAM169AQ9Y6X4 670 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 ZNF263O14978 683 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 ASIC1P78348 528 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 SKOR1P84550 965 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 PDE4CQ08493 712 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 TYW1BQ6NUM6 668 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 C2CD5Q86YS7 1000 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 RASGRP4Q8TDF6 673 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 PLIN2Q99541 437 aa16.71■□□□□ 0.27
PDE1B-207ENST00000550620 DCP1AQ9NPI6 582 aaPredicted RBP16.71■□□□□ 0.27
PDE1B-207ENST00000550620 DMGDHQ9UI17 866 aaKnown RBP16.71■□□□□ 0.27
PDE1B-207ENST00000550620 COL1A1P02452 1464 aaPredicted RBP16.71■□□□□ 0.27
PDE1B-207ENST00000550620 CLSTN1O94985 981 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 FGFR1OPO95684 399 aaKnown RBP16.7■□□□□ 0.26
PDE1B-207ENST00000550620 PLCG1P19174 1290 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 GUCY2CP25092 1073 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 APBA1Q02410 837 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 SBK1Q52WX2 424 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 KRT26Q7Z3Y9 468 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 CCDC84Q86UT8 332 aaPredicted RBP16.7■□□□□ 0.26
PDE1B-207ENST00000550620 RRP36Q96EU6 259 aaKnown RBP16.7■□□□□ 0.26
PDE1B-207ENST00000550620 CACNA1SQ13698 1873 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 GRIN2DO15399 1336 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 ABCB11O95342 1321 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 AKR1B10O60218 316 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 MOCS3O95396 460 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 EZH2Q15910 746 aaKnown RBP16.7■□□□□ 0.26
PDE1B-207ENST00000550620 INF2Q27J81 1249 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 VWA3BQ502W6 1294 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 C8orf74Q6P047 294 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 DGKHQ86XP1 1220 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
PDE1B-207ENST00000550620 DRC1Q96MC2 740 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 MLXIPQ9HAP2 919 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 ARHGAP20Q9P2F6 1191 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 RNF14Q9UBS8 474 aa16.7■□□□□ 0.26
PDE1B-207ENST00000550620 NTSR2O95665 410 aa16.69■□□□□ 0.26
PDE1B-207ENST00000550620 STK4Q13043 487 aa16.69■□□□□ 0.26
PDE1B-207ENST00000550620 B4GALNT4Q76KP1 1039 aa16.69■□□□□ 0.26
PDE1B-207ENST00000550620 SPATS2Q86XZ4 545 aaKnown RBP16.69■□□□□ 0.26
PDE1B-207ENST00000550620 HDAC7Q8WUI4 952 aa16.69■□□□□ 0.26
PDE1B-207ENST00000550620 FLT1P17948 1338 aa16.69■□□□□ 0.26
PDE1B-207ENST00000550620 ATXN2Q99700 1313 aaKnown RBP16.69■□□□□ 0.26
PDE1B-207ENST00000550620 PJA2O43164 708 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 OR52Z1P0C646 297 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 EIF4A3P38919 411 aaKnown RBP16.68■□□□□ 0.26
PDE1B-207ENST00000550620 USP8P40818 1118 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 MATR3P43243 847 aaKnown RBP eCLIP16.68■□□□□ 0.26
PDE1B-207ENST00000550620 IRX3P78415 501 aaPredicted RBP16.68■□□□□ 0.26
PDE1B-207ENST00000550620 HAUS3Q68CZ6 603 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 RCSD1Q6JBY9 416 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 IFT20Q8IY31 132 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 NSUN4Q96CB9 384 aaKnown RBP16.68■□□□□ 0.26
PDE1B-207ENST00000550620 NDST4Q9H3R1 872 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 PLEKP08567 350 aaPredicted RBP16.68■□□□□ 0.26
PDE1B-207ENST00000550620 MAGEA1P43355 309 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 GRM4Q14833 912 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 NFRKBQ6P4R8 1299 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 RNF10Q8N5U6 811 aaKnown RBP16.68■□□□□ 0.26
PDE1B-207ENST00000550620 PNMA1Q8ND90 353 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 EEF2KMTQ96G04 330 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 SIK3Q9Y2K2 1263 aa16.68■□□□□ 0.26
PDE1B-207ENST00000550620 ITGB4P16144 1822 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 HOXA7P31268 230 aaPredicted RBP16.67■□□□□ 0.26
PDE1B-207ENST00000550620 INPP5BP32019 993 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 SLC7A5Q01650 507 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 MAN2A1Q16706 1144 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 CFAP221Q4G0U5 840 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 CENPPQ6IPU0 288 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.67■□□□□ 0.26
PDE1B-207ENST00000550620 HEATR3Q7Z4Q2 680 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 ZNF384Q8TF68 577 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 NOX5Q96PH1 765 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 CCDC87Q9NVE4 849 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 BARHL2Q9NY43 387 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 NIP7Q9Y221 180 aaKnown RBP eCLIP16.67■□□□□ 0.26
PDE1B-207ENST00000550620 ADAMTS2O95450 1211 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 FCER1AP12319 257 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 LIG3P49916 1009 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 TXNRD1Q16881 649 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 KRT25Q7Z3Z0 450 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 LRRC15Q8TF66 581 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 ANKS1AQ92625 1134 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 CALML4Q96GE6 196 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 MMRN2Q9H8L6 949 aa16.67■□□□□ 0.26
PDE1B-207ENST00000550620 FAM207AQ9NSI2 230 aaPredicted RBP16.67■□□□□ 0.26
PDE1B-207ENST00000550620 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
PDE1B-207ENST00000550620 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
PDE1B-207ENST00000550620 MECOMQ03112 1051 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms