RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 CDC42EP5Q6NZY7 148 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 GIMAP6Q6P9H5 292 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 C1orf229Q6ZS94 237 aaPredicted RBP7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 ADGRA1Q86SQ6 560 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 DZIP1Q86YF9 867 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 CERS3Q8IU89 383 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 SMCR8Q8TEV9 937 aaPredicted RBP7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 COA7Q96BR5 231 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 RIOK1Q9BRS2 568 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 ARHGAP39Q9C0H5 1083 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 ETNK1Q9HBU6 452 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 ZNF112Q9UJU3 913 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 KCNH4Q9UQ05 1017 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 ZHX2Q9Y6X8 837 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 OTOFQ9HC10 1997 aa7.28□□□□□ -1.24
DEPDC4-209ENST00000550587 ZMYM6O95789 1325 aa7.27□□□□□ -1.24
DEPDC4-209ENST00000550587 GSG1L2A8MUP6 293 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 H0YGN5 161 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 CTNND1O60716 968 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 ENTPD3O75355 529 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 BAG3O95817 575 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 TFRCP02786 760 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 APPP05067 770 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 GJB1P08034 283 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 CYP21A2P08686 494 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 CCL5P13501 91 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 GJA8P48165 433 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 PABPC4Q13310 644 aaKnown RBP eCLIP7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 IMMTQ16891 758 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 OXLD1Q5BKU9 147 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 NOL9Q5SY16 702 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 GADL1Q6ZQY3 521 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 RNF135Q8IUD6 432 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 SCYL3Q8IZE3 742 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 IFNL3Q8IZI9 196 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 MIGA1Q8NAN2 632 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 GALNT6Q8NCL4 622 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 NOL10Q9BSC4 688 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 NACAP1Q9BZK3 213 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 ALDH8A1Q9H2A2 487 aaPredicted RBP7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 ARMT1Q9H993 441 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 SLC45A1Q9Y2W3 748 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 DAGLAQ9Y4D2 1042 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 MYH2Q9UKX2 1941 aa7.27□□□□□ -1.25
DEPDC4-209ENST00000550587 GPR75-ASB3A0A0A6YYF3 556 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 ZNF213O14771 459 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 TNPO2O14787 897 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 MSTNO14793 375 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 ADCY3O60266 1144 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 HMGB1P09429 215 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 MCM2P49736 904 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 VAC14Q08AM6 782 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 USP4Q13107 963 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 TLR1Q15399 786 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 ADCK5Q3MIX3 580 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 RUFY3Q7L099 469 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 PGBD3Q8N328 593 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 LCORLQ8N3X6 602 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 ABHD17AQ96GS6 310 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 JAKMIP1Q96N16 626 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 SPOCK3Q9BQ16 436 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 CRNKL1Q9BZJ0 848 aaKnown RBP7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 ATP8A2Q9NTI2 1148 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 PHF24Q9UPV7 400 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 CYP46A1Q9Y6A2 500 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 SLC4A4Q9Y6R1 1079 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 MROH7-TTC4A0A0A0MT08 1334 aa7.26□□□□□ -1.25
DEPDC4-209ENST00000550587 E7EWF7 191 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 C2CD2LO14523 706 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 PRKAB2O43741 272 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 FARP2O94887 1054 aaPredicted RBP7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 SGPL1O95470 568 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 CYP2C8P10632 490 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 PTPRAP18433 802 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 CASTP20810 708 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 DYNLL1P63167 89 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 CAP1Q01518 475 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 PICALMQ13492 652 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 MTFR1Q15390 333 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 HSCBQ8IWL3 235 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 CCAR1Q8IX12 1150 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 RHBDD1Q8TEB9 315 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 U2AF1L4Q8WU68 220 aaKnown RBP7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 TTC14Q96N46 770 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 NEK1Q96PY6 1258 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 IDI2Q9BXS1 227 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 NAPBQ9H115 298 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 AATFQ9NY61 560 aaKnown RBP eCLIP7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 AFG3L2Q9Y4W6 797 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 TAF6LQ9Y6J9 622 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 MAST2Q6P0Q8 1798 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 GAKO14976 1311 aa7.25□□□□□ -1.25
DEPDC4-209ENST00000550587 A0A0G2JLL6 359 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 TRIM75PA6NK02 468 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 K7ELQ4 463 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 BNIP3LO60238 219 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 RPS6KB1P23443 525 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 BTDP43251 543 aa7.24□□□□□ -1.25
DEPDC4-209ENST00000550587 GCLCP48506 637 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms