RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 ACAD9Q9H845 621 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 MORF4L1Q9UBU8 362 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
RAB5C-207ENST00000550504 GCOM1H8Y6P7 765 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-207ENST00000550504 M0R2N6 131 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 MEIS2O14770 477 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 CA12O43570 354 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 TLR2O60603 784 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 TBC1D8O95759 1140 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 SLC25A27O95847 323 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 ALDH1A1P00352 501 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 POLR2MP0CAP2 368 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 CCNA1P78396 465 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 FAM110CQ1W6H9 321 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 EARS2Q5JPH6 523 aaKnown RBP11.78□□□□□ -0.52
RAB5C-207ENST00000550504 SLC30A10Q6XR72 485 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 PIK3AP1Q6ZUJ8 805 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 FCHSD1Q86WN1 690 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 MCF2L2Q86YR7 1114 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 NOSTRINQ8IVI9 506 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 CCAR1Q8IX12 1150 aaKnown RBP11.78□□□□□ -0.52
RAB5C-207ENST00000550504 CHST13Q8NET6 341 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 TNFRSF25Q93038 417 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 GLT8D2Q9H1C3 349 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 PORCNQ9H237 461 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 FOXP1Q9H334 677 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-207ENST00000550504 ZSCAN16Q9H4T2 348 aaPredicted RBP11.78□□□□□ -0.52
RAB5C-207ENST00000550504 EFCC1Q9HA90 598 aa11.78□□□□□ -0.52
RAB5C-207ENST00000550504 CCDC194A0A1B0GVG4 234 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 FOXN1O15353 648 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 TRPA1O75762 1119 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 BCRP11274 1271 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 ATP2B1P20020 1258 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 U2AF2P26368 475 aaKnown RBP eCLIP11.77□□□□□ -0.53
RAB5C-207ENST00000550504 COPB2P35606 906 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 CLK2P49760 499 aaKnown RBP11.77□□□□□ -0.53
RAB5C-207ENST00000550504 BAATQ14032 418 aaPredicted RBP11.77□□□□□ -0.53
RAB5C-207ENST00000550504 C17orf99Q6UX52 265 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 RNF207Q6ZRF8 634 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 KRT25Q7Z3Z0 450 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 ANKRD35Q8N283 1001 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 CHAMP1Q96JM3 812 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 MROH8Q9H579 483 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 RNF186Q9NXI6 227 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 FBXO40Q9UH90 709 aa11.77□□□□□ -0.53
RAB5C-207ENST00000550504 RBBP6Q7Z6E9 1792 aaKnown RBP11.77□□□□□ -0.53
RAB5C-207ENST00000550504 SPDYE3A6NKU9 549 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 HSD17B4P51659 736 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 RPS6P62753 249 aaKnown RBP11.76□□□□□ -0.53
RAB5C-207ENST00000550504 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
RAB5C-207ENST00000550504 INF2Q27J81 1249 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 BRAPQ7Z569 592 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 SHCBP1Q8NEM2 672 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 SYTL5Q8TDW5 730 aaPredicted RBP11.76□□□□□ -0.53
RAB5C-207ENST00000550504 TNPO1Q92973 898 aaKnown RBP11.76□□□□□ -0.53
RAB5C-207ENST00000550504 PURBQ96QR8 312 aaKnown RBP11.76□□□□□ -0.53
RAB5C-207ENST00000550504 MMP19Q99542 508 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 ANO3Q9BYT9 981 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 A1CFQ9NQ94 594 aaKnown RBP11.76□□□□□ -0.53
RAB5C-207ENST00000550504 PRDM10Q9NQV6 1147 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 CYP39A1Q9NYL5 469 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 COL20A1Q9P218 1284 aa11.76□□□□□ -0.53
RAB5C-207ENST00000550504 NCLP19338 710 aaKnown RBP11.75□□□□□ -0.53
RAB5C-207ENST00000550504 UBXN2AP68543 259 aa11.75□□□□□ -0.53
RAB5C-207ENST00000550504 CNTN2Q02246 1040 aa11.75□□□□□ -0.53
RAB5C-207ENST00000550504 AP3B2Q13367 1082 aa11.75□□□□□ -0.53
RAB5C-207ENST00000550504 NBR1Q14596 966 aa11.75□□□□□ -0.53
RAB5C-207ENST00000550504 KCTD2Q14681 263 aa11.75□□□□□ -0.53
RAB5C-207ENST00000550504 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
RAB5C-207ENST00000550504 TBCKQ8TEA7 893 aa11.75□□□□□ -0.53
RAB5C-207ENST00000550504 ATP6V1DQ9Y5K8 247 aa11.75□□□□□ -0.53
RAB5C-207ENST00000550504 FOSP01100 380 aaPredicted RBP11.74□□□□□ -0.53
RAB5C-207ENST00000550504 PGK2P07205 417 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 FCER1AP12319 257 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 MAPK4P31152 587 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 GHRHRQ02643 423 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 CEBPZQ03701 1054 aaKnown RBP11.74□□□□□ -0.53
RAB5C-207ENST00000550504 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
RAB5C-207ENST00000550504 MCTP2Q6DN12 878 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 GPR142Q7Z601 462 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 SAMD3Q8N6K7 520 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 TAAR1Q96RJ0 339 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 FTOQ9C0B1 505 aaKnown RBP eCLIP11.74□□□□□ -0.53
RAB5C-207ENST00000550504 MAP3K20Q9NYL2 800 aaKnown RBP11.74□□□□□ -0.53
RAB5C-207ENST00000550504 TFIP11Q9UBB9 837 aaKnown RBP11.74□□□□□ -0.53
RAB5C-207ENST00000550504 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
RAB5C-207ENST00000550504 IVNS1ABPQ9Y6Y0 642 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 PFASO15067 1338 aa11.74□□□□□ -0.53
RAB5C-207ENST00000550504 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 WNT7AO00755 349 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 PLXNB2O15031 1838 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 SLC34A2O95436 690 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 EIF2AK2P19525 551 aaKnown RBP11.73□□□□□ -0.53
RAB5C-207ENST00000550504 TOB1P50616 345 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-207ENST00000550504 LETM2Q2VYF4 491 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 RILPL1Q5EBL4 403 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 ARHGEF16Q5VV41 709 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms