RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 FAM109BQ6ICB4 259 aaPredicted RBP23.26■■□□□ 1.31
GCN1-207ENST00000550471 ADGRF4Q8IZF3 695 aa23.26■■□□□ 1.31
GCN1-207ENST00000550471 BADQ92934 168 aa23.26■■□□□ 1.31
GCN1-207ENST00000550471 TRIM43Q96BQ3 446 aaPredicted RBP23.26■■□□□ 1.31
GCN1-207ENST00000550471 LRCH3Q96II8 777 aa23.26■■□□□ 1.31
GCN1-207ENST00000550471 MTA3Q9BTC8 594 aa23.26■■□□□ 1.31
GCN1-207ENST00000550471 MCM3APO60318 1980 aa23.26■■□□□ 1.31
GCN1-207ENST00000550471 ASTN1O14525 1302 aa23.26■■□□□ 1.31
GCN1-207ENST00000550471 DYNC1LI2O43237 492 aaPredicted RBP23.25■■□□□ 1.31
GCN1-207ENST00000550471 ADCY6O43306 1168 aa23.25■■□□□ 1.31
GCN1-207ENST00000550471 DHX16O60231 1041 aaKnown RBP23.25■■□□□ 1.31
GCN1-207ENST00000550471 SMPD1P17405 629 aa23.25■■□□□ 1.31
GCN1-207ENST00000550471 CPT1AP50416 773 aa23.25■■□□□ 1.31
GCN1-207ENST00000550471 IRX6P78412 446 aaPredicted RBP23.25■■□□□ 1.31
GCN1-207ENST00000550471 FAAP100Q0VG06 881 aa23.25■■□□□ 1.31
GCN1-207ENST00000550471 FBXO11Q86XK2 927 aa23.25■■□□□ 1.31
GCN1-207ENST00000550471 FBXO16Q8IX29 292 aaPredicted RBP23.25■■□□□ 1.31
GCN1-207ENST00000550471 SCFD2Q8WU76 684 aa23.25■■□□□ 1.31
GCN1-207ENST00000550471 UBA5Q9GZZ9 404 aa23.25■■□□□ 1.31
GCN1-207ENST00000550471 POLR3EQ9NVU0 708 aa23.25■■□□□ 1.31
GCN1-207ENST00000550471 MYADML2A6NDP7 307 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 CTAGE5O15320 804 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 KPNA6O60684 536 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 CYP21A2P08686 494 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 EDNRBP24530 442 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 SEC23AQ15436 765 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 MAP4K1Q92918 833 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 IWS1Q96ST2 819 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 AMNQ9BXJ7 453 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 WDR11Q9BZH6 1224 aa23.24■■□□□ 1.31
GCN1-207ENST00000550471 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.23■■□□□ 1.31
GCN1-207ENST00000550471 TIMP1P01033 207 aa23.23■■□□□ 1.31
GCN1-207ENST00000550471 FPGSQ05932 587 aa23.23■■□□□ 1.31
GCN1-207ENST00000550471 USH1GQ495M9 461 aa23.23■■□□□ 1.31
GCN1-207ENST00000550471 SLC30A10Q6XR72 485 aa23.23■■□□□ 1.31
GCN1-207ENST00000550471 EEPD1Q7L9B9 569 aa23.23■■□□□ 1.31
GCN1-207ENST00000550471 SH3RF1Q7Z6J0 888 aa23.23■■□□□ 1.31
GCN1-207ENST00000550471 NSUN6Q8TEA1 469 aaKnown RBP23.23■■□□□ 1.31
GCN1-207ENST00000550471 IL25Q9H293 177 aa23.23■■□□□ 1.31
GCN1-207ENST00000550471 LTBP2Q14767 1821 aa23.23■■□□□ 1.31
GCN1-207ENST00000550471 KLRF2D3W0D1 207 aa23.22■■□□□ 1.31
GCN1-207ENST00000550471 IFIT3O14879 490 aaKnown RBP23.22■■□□□ 1.31
GCN1-207ENST00000550471 PPP2R5BQ15173 497 aa23.22■■□□□ 1.31
GCN1-207ENST00000550471 QRICH1Q2TAL8 776 aa23.22■■□□□ 1.31
GCN1-207ENST00000550471 SLC43A3Q8NBI5 491 aa23.22■■□□□ 1.31
GCN1-207ENST00000550471 PDGFCQ9NRA1 345 aa23.22■■□□□ 1.31
GCN1-207ENST00000550471 TBX21Q9UL17 535 aa23.22■■□□□ 1.31
GCN1-207ENST00000550471 PPIGQ13427 754 aaKnown RBP eCLIP23.21■■□□□ 1.311e-8■■□□□ 14.4
GCN1-207ENST00000550471 TTLL4Q14679 1199 aa23.21■■□□□ 1.31
GCN1-207ENST00000550471 WTAPQ15007 396 aa23.21■■□□□ 1.31
GCN1-207ENST00000550471 CENPQQ7L2Z9 268 aaPredicted RBP23.21■■□□□ 1.31
GCN1-207ENST00000550471 TMTC2Q8N394 836 aa23.21■■□□□ 1.31
GCN1-207ENST00000550471 TMEM199Q8N511 208 aa23.21■■□□□ 1.31
GCN1-207ENST00000550471 DEFB123Q8N688 67 aa23.21■■□□□ 1.31
GCN1-207ENST00000550471 JMJD4Q9H9V9 463 aa23.21■■□□□ 1.31
GCN1-207ENST00000550471 GPHNQ9NQX3 736 aaPredicted RBP23.21■■□□□ 1.31
GCN1-207ENST00000550471 PALM3A6NDB9 673 aaPredicted RBP23.2■■□□□ 1.3
GCN1-207ENST00000550471 E7EWF7 191 aa23.2■■□□□ 1.3
GCN1-207ENST00000550471 ZBTB5O15062 677 aa23.2■■□□□ 1.3
GCN1-207ENST00000550471 SMAD3P84022 425 aaKnown RBP23.2■■□□□ 1.3
GCN1-207ENST00000550471 BEX3Q00994 111 aa23.2■■□□□ 1.3
GCN1-207ENST00000550471 PTH1RQ03431 593 aa23.2■■□□□ 1.3
GCN1-207ENST00000550471 ITGA7Q13683 1181 aa23.2■■□□□ 1.3
GCN1-207ENST00000550471 MFSD5Q6N075 450 aa23.2■■□□□ 1.3
GCN1-207ENST00000550471 FAM126BQ8IXS8 530 aa23.2■■□□□ 1.3
GCN1-207ENST00000550471 MAP3K14Q99558 947 aa23.2■■□□□ 1.3
GCN1-207ENST00000550471 LRRC37A2A6NM11 1700 aa23.19■■□□□ 1.3
GCN1-207ENST00000550471 SUPT20HL2P0C7V6 817 aa23.19■■□□□ 1.3
GCN1-207ENST00000550471 GHRHRQ02643 423 aa23.19■■□□□ 1.3
GCN1-207ENST00000550471 SHHQ15465 462 aa23.19■■□□□ 1.3
GCN1-207ENST00000550471 STXBP2Q15833 593 aa23.19■■□□□ 1.3
GCN1-207ENST00000550471 CXCL17Q6UXB2 119 aa23.19■■□□□ 1.3
GCN1-207ENST00000550471 CYB5R4Q7L1T6 521 aa23.19■■□□□ 1.3
GCN1-207ENST00000550471 CATIPQ7Z7H3 387 aa23.19■■□□□ 1.3
GCN1-207ENST00000550471 MTMR8Q96EF0 704 aa23.19■■□□□ 1.3
GCN1-207ENST00000550471 GRM4Q14833 912 aa23.18■■□□□ 1.3
GCN1-207ENST00000550471 OR6J1Q8NGC5 347 aa23.18■■□□□ 1.3
GCN1-207ENST00000550471 SYTL5Q8TDW5 730 aaPredicted RBP23.18■■□□□ 1.3
GCN1-207ENST00000550471 PURBQ96QR8 312 aaKnown RBP23.18■■□□□ 1.3
GCN1-207ENST00000550471 VAT1LQ9HCJ6 419 aa23.18■■□□□ 1.3
GCN1-207ENST00000550471 MAD2L2Q9UI95 211 aa23.18■■□□□ 1.3
GCN1-207ENST00000550471 TMEM265A0A087WTH1 108 aa23.17■■□□□ 1.3
GCN1-207ENST00000550471 CD4P01730 458 aa23.17■■□□□ 1.3
GCN1-207ENST00000550471 BMP2KLQ5H9B9 411 aa23.17■■□□□ 1.3
GCN1-207ENST00000550471 CASC1Q6TDU7 716 aa23.17■■□□□ 1.3
GCN1-207ENST00000550471 RMDN3Q96TC7 470 aa23.17■■□□□ 1.3
GCN1-207ENST00000550471 MTG1Q9BT17 334 aaPredicted RBP23.17■■□□□ 1.3
GCN1-207ENST00000550471 CPVLQ9H3G5 476 aa23.17■■□□□ 1.3
GCN1-207ENST00000550471 RIOX1Q9H6W3 641 aa23.17■■□□□ 1.3
GCN1-207ENST00000550471 RBM8AQ9Y5S9 174 aaKnown RBP23.17■■□□□ 1.3
GCN1-207ENST00000550471 LCTP09848 1927 aa23.16■■□□□ 1.3
GCN1-207ENST00000550471 TXNP10599 105 aaKnown RBP23.16■■□□□ 1.3
GCN1-207ENST00000550471 SMARCA1P28370 1054 aa23.16■■□□□ 1.3
GCN1-207ENST00000550471 KIF5BP33176 963 aa23.16■■□□□ 1.3
GCN1-207ENST00000550471 TMEM67Q5HYA8 995 aa23.16■■□□□ 1.3
GCN1-207ENST00000550471 ZNF697Q5TEC3 545 aa23.16■■□□□ 1.3
GCN1-207ENST00000550471 KCNV1Q6PIU1 500 aa23.16■■□□□ 1.3
GCN1-207ENST00000550471 RNPC3Q96LT9 517 aaKnown RBP23.16■■□□□ 1.3
GCN1-207ENST00000550471 LZTS2Q9BRK4 669 aa23.16■■□□□ 1.3
GCN1-207ENST00000550471 MTIF3Q9H2K0 278 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms