RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 BCL11AQ9H165 835 aa4.68□□□□□ -1.66
CCNT1-203ENST00000550457 ZNF214Q9UL59 606 aaPredicted RBP4.68□□□□□ -1.66
CCNT1-203ENST00000550457 LTBP3Q9NS15 1303 aa4.68□□□□□ -1.66
CCNT1-203ENST00000550457 RB1CC1Q8TDY2 1594 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 NOBOXO60393 691 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 NCAM1P13591 858 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 ITGA4P13612 1032 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 INSRRP14616 1297 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 GUCY2CP25092 1073 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 ZXDCQ2QGD7 858 aaPredicted RBP4.67□□□□□ -1.66
CCNT1-203ENST00000550457 ZNF326Q5BKZ1 582 aaKnown RBP4.67□□□□□ -1.66
CCNT1-203ENST00000550457 UBXN11Q5T124 520 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 TMEM87AQ8NBN3 555 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 RBBP8NLQ8NC74 664 aaPredicted RBP4.67□□□□□ -1.66
CCNT1-203ENST00000550457 ALG3Q92685 438 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 FERD3LQ96RJ6 166 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 USP40Q9NVE5 1235 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 FAN1Q9Y2M0 1017 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 SF3B6Q9Y3B4 125 aaKnown RBP4.67□□□□□ -1.66
CCNT1-203ENST00000550457 PCDHGB7Q9Y5F8 929 aa4.67□□□□□ -1.66
CCNT1-203ENST00000550457 RSF1Q96T23 1441 aaPredicted RBP4.66□□□□□ -1.66
CCNT1-203ENST00000550457 TBC1D8O95759 1140 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 POU4F1Q01851 419 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 PPP2R5DQ14738 602 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 ZNF394Q53GI3 561 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 FBXW10Q5XX13 1052 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 RCSD1Q6JBY9 416 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 CARFQ8N187 725 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 ADCY4Q8NFM4 1077 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 DDX1Q92499 740 aaKnown RBP4.66□□□□□ -1.66
CCNT1-203ENST00000550457 TSPAN17Q96FV3 270 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 TMPRSS5Q9H3S3 457 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 DBR1Q9UK59 544 aaKnown RBP4.66□□□□□ -1.66
CCNT1-203ENST00000550457 RWDD3Q9Y3V2 267 aa4.66□□□□□ -1.66
CCNT1-203ENST00000550457 A0A087WZG4 1122 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 K7ESM1 405 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 AURKAO14965 403 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 ZNF76P36508 570 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 USP48Q86UV5 1035 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 BORCS6Q96GS4 357 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 HAUS7Q99871 368 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 MTA3Q9BTC8 594 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 LNPKQ9C0E8 428 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 KLHL25Q9H0H3 589 aa4.65□□□□□ -1.67
CCNT1-203ENST00000550457 SPATA6Q9NWH7 488 aaPredicted RBP4.65□□□□□ -1.67
CCNT1-203ENST00000550457 DIS3Q9Y2L1 958 aaKnown RBP4.65□□□□□ -1.67
CCNT1-203ENST00000550457 STXBP3O00186 592 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 VAMP4O75379 141 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 CNR2P34972 360 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 FANCCQ00597 558 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 PUM1Q14671 1186 aaKnown RBP eCLIP4.64□□□□□ -1.67
CCNT1-203ENST00000550457 EEF1DP3Q658K8 133 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 CCDC81Q6ZN84 652 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 LZTR1Q8N653 840 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 SMARCC2Q8TAQ2 1214 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 CPA5Q8WXQ8 436 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 BACH2Q9BYV9 841 aa4.64□□□□□ -1.67
CCNT1-203ENST00000550457 CNOT11Q9UKZ1 510 aaKnown RBP4.64□□□□□ -1.67
CCNT1-203ENST00000550457 ITGB3P05106 788 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 ZNF16P17020 682 aaPredicted RBP4.63□□□□□ -1.67
CCNT1-203ENST00000550457 RACK1P63244 317 aaKnown RBP4.63□□□□□ -1.67
CCNT1-203ENST00000550457 TCEAL1Q15170 157 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 DPY19L1Q2PZI1 675 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 ZNF761Q86XN6 746 aaPredicted RBP4.63□□□□□ -1.67
CCNT1-203ENST00000550457 CPNE8Q86YQ8 564 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 RGS22Q8NE09 1264 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 RBM15Q96T37 977 aaKnown RBP eCLIP4.63□□□□□ -1.67
CCNT1-203ENST00000550457 SYT3Q9BQG1 590 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 WHRNQ9P202 907 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 GULP1Q9UBP9 304 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 PCDHB10Q9UN67 800 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 MYRFQ9Y2G1 1151 aa4.63□□□□□ -1.67
CCNT1-203ENST00000550457 EPHX1P07099 455 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 C8BP07358 591 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 MAGEA10P43363 369 aaPredicted RBP4.62□□□□□ -1.67
CCNT1-203ENST00000550457 GJA9P57773 515 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 CACNB2Q08289 660 aaPredicted RBP4.62□□□□□ -1.67
CCNT1-203ENST00000550457 GNPTABQ3T906 1256 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 NETO2Q8NC67 525 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 PEX11GQ96HA9 241 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 FGD4Q96M96 766 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 GPR20Q99678 358 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 GINM1Q9NU53 330 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 CGGBP1Q9UFW8 167 aaPredicted RBP4.62□□□□□ -1.67
CCNT1-203ENST00000550457 DDX41Q9UJV9 622 aaKnown RBP4.62□□□□□ -1.67
CCNT1-203ENST00000550457 SIT1Q9Y3P8 196 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 EEA1Q15075 1411 aa4.62□□□□□ -1.67
CCNT1-203ENST00000550457 C2orf71A6NGG8 1288 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 SARSP49591 514 aaKnown RBP4.61□□□□□ -1.67
CCNT1-203ENST00000550457 ADAM17P78536 824 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 SMAD4Q13485 552 aaKnown RBP4.61□□□□□ -1.67
CCNT1-203ENST00000550457 SLC9A5Q14940 896 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 ZNF827Q17R98 1081 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 MBLAC2Q68D91 279 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 HEATR6Q6AI08 1181 aaKnown RBP4.61□□□□□ -1.67
CCNT1-203ENST00000550457 WWC2Q6AWC2 1192 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 CABP7Q86V35 215 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 ARHGEF39Q8N4T4 335 aa4.61□□□□□ -1.67
CCNT1-203ENST00000550457 LINC00482Q8N8I6 264 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms