RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 RAB11FIP4Q86YS3 637 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 SYTL5Q8TDW5 730 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-221ENST00000550100 TCEANC2Q96MN5 208 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 TAAR1Q96RJ0 339 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 PIGSQ96S52 555 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 GDF15Q99988 308 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 RIOX1Q9H6W3 641 aa13.76□□□□□ -0.21
LETMD1-221ENST00000550100 A0A1W2PQ45 241 aaPredicted RBP13.75□□□□□ -0.21
LETMD1-221ENST00000550100 A0A1W2PQY0 241 aa13.75□□□□□ -0.21
LETMD1-221ENST00000550100 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
LETMD1-221ENST00000550100 RXRAP19793 462 aa13.75□□□□□ -0.21
LETMD1-221ENST00000550100 EDNRBP24530 442 aa13.75□□□□□ -0.21
LETMD1-221ENST00000550100 ACLYP53396 1101 aa13.75□□□□□ -0.21
LETMD1-221ENST00000550100 GJA9P57773 515 aa13.75□□□□□ -0.21
LETMD1-221ENST00000550100 TNFAIP2Q03169 654 aa13.75□□□□□ -0.21
LETMD1-221ENST00000550100 RGS22Q8NE09 1264 aa13.75□□□□□ -0.21
LETMD1-221ENST00000550100 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
LETMD1-221ENST00000550100 ATP11BQ9Y2G3 1177 aa13.75□□□□□ -0.21
LETMD1-221ENST00000550100 CPA1P15085 419 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 ITGB8P26012 769 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 MCM5P33992 734 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 MAGEA10P43363 369 aaPredicted RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 FXR1P51114 621 aaKnown RBP eCLIP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 NKX3-2P78367 333 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 EXOSC10Q01780 885 aaKnown RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 RNF180Q86T96 592 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 ZNF654Q8IZM8 581 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 CMTR1Q8N1G2 835 aaKnown RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 ABCB11O95342 1321 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 RBM47A0AV96 593 aaKnown RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 ERICH2A1L162 156 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 TRIM43BA6NCK2 446 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 ZBTB5O15062 677 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 DYNC1LI2O43237 492 aaPredicted RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 PLEKHA8P1O95397 391 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 C6orf222P0C671 652 aaPredicted RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 CST5P28325 142 aaPredicted RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 TLE2Q04725 743 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 TSGA10IPQ3SY00 556 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 HOMER1Q86YM7 354 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 SRBD1Q8N5C6 995 aaKnown RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 KCNB2Q92953 911 aa13.74□□□□□ -0.21
LETMD1-221ENST00000550100 TRIM43Q96BQ3 446 aaPredicted RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 TSEN34Q9BSV6 310 aaKnown RBP13.74□□□□□ -0.21
LETMD1-221ENST00000550100 ARIH2O95376 493 aa13.73□□□□□ -0.21
LETMD1-221ENST00000550100 ASGR1P07306 291 aa13.73□□□□□ -0.21
LETMD1-221ENST00000550100 MDM2Q00987 491 aaPredicted RBP13.73□□□□□ -0.21
LETMD1-221ENST00000550100 SART3Q15020 963 aaKnown RBP13.73□□□□□ -0.21
LETMD1-221ENST00000550100 GNASQ5JWF2 1037 aa13.73□□□□□ -0.21
LETMD1-221ENST00000550100 IQSEC1Q6DN90 963 aa13.73□□□□□ -0.21
LETMD1-221ENST00000550100 CATIPQ7Z7H3 387 aa13.73□□□□□ -0.21
LETMD1-221ENST00000550100 COPS5Q92905 334 aa13.73□□□□□ -0.21
LETMD1-221ENST00000550100 VTA1Q9NP79 307 aa13.73□□□□□ -0.21
LETMD1-221ENST00000550100 PPP4R2Q9NY27 417 aa13.73□□□□□ -0.21
LETMD1-221ENST00000550100 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
LETMD1-221ENST00000550100 BRPF3Q9ULD4 1205 aa13.73□□□□□ -0.21
LETMD1-221ENST00000550100 GRIN2DO15399 1336 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 hCG_1642624A0A1W2PR95 340 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 SOX1O00570 391 aaPredicted RBP13.72□□□□□ -0.21
LETMD1-221ENST00000550100 SLC34A2O95436 690 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 NEFLP07196 543 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 HOXA13P31271 388 aaPredicted RBP13.72□□□□□ -0.21
LETMD1-221ENST00000550100 HSD17B4P51659 736 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 C1orf53Q5VUE5 145 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 CASC1Q6TDU7 716 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 NOL8Q76FK4 1167 aaKnown RBP13.72□□□□□ -0.21
LETMD1-221ENST00000550100 TLK2Q86UE8 772 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 TMEM87BQ96K49 555 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 NEK1Q96PY6 1258 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 AMNQ9BXJ7 453 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 PDLIM7Q9NR12 457 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 PNMA2Q9UL42 364 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
LETMD1-221ENST00000550100 PCDHA1Q9Y5I3 950 aa13.72□□□□□ -0.21
LETMD1-221ENST00000550100 PNMA6FA0A0J9YX94 578 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 DDAH1O94760 285 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 CFBP00751 764 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 LIFRP42702 1097 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 CDK7P50613 346 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 GHRHRQ02643 423 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 DNERQ8NFT8 737 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 IL31RAQ8NI17 732 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 ZFP91Q96JP5 570 aaPredicted RBP13.71□□□□□ -0.21
LETMD1-221ENST00000550100 MAP3K14Q99558 947 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 MTA3Q9BTC8 594 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 WDR11Q9BZH6 1224 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 SNX14Q9Y5W7 946 aa13.71□□□□□ -0.21
LETMD1-221ENST00000550100 RBAK-RBAKDNI3L0D1 243 aa13.7□□□□□ -0.22
LETMD1-221ENST00000550100 BMP8BP34820 402 aa13.7□□□□□ -0.22
LETMD1-221ENST00000550100 PDE4DQ08499 809 aa13.7□□□□□ -0.22
LETMD1-221ENST00000550100 FAAP100Q0VG06 881 aa13.7□□□□□ -0.22
LETMD1-221ENST00000550100 FSCN1Q16658 493 aaKnown RBP13.7□□□□□ -0.22
LETMD1-221ENST00000550100 DUSP28Q4G0W2 176 aa13.7□□□□□ -0.22
LETMD1-221ENST00000550100 CCDC62Q6P9F0 684 aa13.7□□□□□ -0.22
LETMD1-221ENST00000550100 NFXL1Q6ZNB6 911 aa13.7□□□□□ -0.22
LETMD1-221ENST00000550100 SGMS1Q86VZ5 419 aa13.7□□□□□ -0.22
LETMD1-221ENST00000550100 PPP1R13LQ8WUF5 828 aa13.7□□□□□ -0.22
LETMD1-221ENST00000550100 RMDN3Q96TC7 470 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms