RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 RRP12Q5JTH9 1297 aaKnown RBP15.99■□□□□ 0.15
TROAP-211ENST00000549891 ANKRD45Q5TZF3 282 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 VPS53Q5VIR6 699 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 RASGRP2Q7LDG7 609 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 OTOP2Q7RTS6 562 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 USP38Q8NB14 1042 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 ATXN2LQ8WWM7 1075 aaKnown RBP15.99■□□□□ 0.15
TROAP-211ENST00000549891 TMEM47Q9BQJ4 181 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 WDR11Q9BZH6 1224 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 TRPV6Q9H1D0 765 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 ALDH8A1Q9H2A2 487 aaPredicted RBP15.99■□□□□ 0.15
TROAP-211ENST00000549891 PRDM6Q9NQX0 595 aa15.99■□□□□ 0.15
TROAP-211ENST00000549891 GPHNQ9NQX3 736 aaPredicted RBP15.99■□□□□ 0.15
TROAP-211ENST00000549891 CXXC1Q9P0U4 656 aaPredicted RBP15.99■□□□□ 0.15
TROAP-211ENST00000549891 ZMYM6O95789 1325 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 UMODL1Q5DID0 1318 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 B4DLN1 442 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 PFKMP08237 780 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 PCP11498 1178 aaKnown RBP15.98■□□□□ 0.15
TROAP-211ENST00000549891 MRPL12P52815 198 aaKnown RBP15.98■□□□□ 0.15
TROAP-211ENST00000549891 PSMC6P62333 389 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 TTBK2Q6IQ55 1244 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 PPM1EQ8WY54 764 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 TTC14Q96N46 770 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 PURBQ96QR8 312 aaKnown RBP15.98■□□□□ 0.15
TROAP-211ENST00000549891 SLC4A7Q9Y6M7 1214 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 DDX49Q9Y6V7 483 aaKnown RBP15.98■□□□□ 0.15
TROAP-211ENST00000549891 CHD9Q3L8U1 2897 aa15.98■□□□□ 0.15
TROAP-211ENST00000549891 FRMPD2Q68DX3 1309 aaPredicted RBP15.97■□□□□ 0.15
TROAP-211ENST00000549891 SCN10AQ9Y5Y9 1956 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 NFIBO00712 420 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 NKRFO15226 690 aaKnown RBP eCLIP15.97■□□□□ 0.15
TROAP-211ENST00000549891 FGAP02671 866 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 PTGS1P23219 599 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 RNF207Q6ZRF8 634 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 WNT8AQ9H1J5 351 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 NKX2-4Q9H2Z4 354 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 GPCPD1Q9NPB8 672 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 THEGQ9P2T0 379 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 TTC28Q96AY4 2481 aa15.97■□□□□ 0.15
TROAP-211ENST00000549891 TNKSO95271 1327 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 MYH6P13533 1939 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 RBM47A0AV96 593 aaKnown RBP15.96■□□□□ 0.15
TROAP-211ENST00000549891 ZBBXA8MT70 800 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 KPNA6O60684 536 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 MYL3P08590 195 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 PDHBP11177 359 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 IGFBP4P22692 258 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 CALML3P27482 149 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 PDE1AP54750 535 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 PURAQ00577 322 aaKnown RBP15.96■□□□□ 0.15
TROAP-211ENST00000549891 PDE4DQ08499 809 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 PPP2R5BQ15173 497 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 DNERQ8NFT8 737 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 OR6J1Q8NGC5 347 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 MTG1Q9BT17 334 aaPredicted RBP15.96■□□□□ 0.15
TROAP-211ENST00000549891 TSPYL2Q9H2G4 693 aaPredicted RBP15.96■□□□□ 0.15
TROAP-211ENST00000549891 PCDHA11Q9Y5I1 949 aa15.96■□□□□ 0.15
TROAP-211ENST00000549891 SCN5AQ14524 2016 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 WDR19Q8NEZ3 1342 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 TNFRSF10AO00220 468 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 HSPD1P10809 573 aaKnown RBP15.95■□□□□ 0.14
TROAP-211ENST00000549891 ACTN1P12814 892 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 MFAP1P55081 439 aaKnown RBP15.95■□□□□ 0.14
TROAP-211ENST00000549891 TMEM63BQ5T3F8 832 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 GPATCH4Q5T3I0 446 aaKnown RBP15.95■□□□□ 0.14
TROAP-211ENST00000549891 PPP2R2DQ66LE6 453 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 SLC30A10Q6XR72 485 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 MFSD6Q6ZSS7 791 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 SCFD2Q8WU76 684 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 SCLYQ96I15 445 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 FAM227BQ96M60 508 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 RNF41Q9H4P4 317 aaPredicted RBP15.95■□□□□ 0.14
TROAP-211ENST00000549891 TRMT13Q9NUP7 481 aaKnown RBP15.95■□□□□ 0.14
TROAP-211ENST00000549891 TANC1Q9C0D5 1861 aa15.95■□□□□ 0.14
TROAP-211ENST00000549891 A0A0D9SFI3 127 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 ATP2A2P16615 1042 aaKnown RBP15.94■□□□□ 0.14
TROAP-211ENST00000549891 RFC2P35250 354 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 NT5C2P49902 561 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 RPS6P62753 249 aaKnown RBP15.94■□□□□ 0.14
TROAP-211ENST00000549891 MRPS5P82675 430 aaKnown RBP15.94■□□□□ 0.14
TROAP-211ENST00000549891 ZNF543Q08ER8 600 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 NFRKBQ6P4R8 1299 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 IL27Q8NEV9 243 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 CLEC4DQ8WXI8 215 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 ESR2Q92731 530 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 ASB2Q96Q27 587 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 MAF1Q9H063 256 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 YBX2Q9Y2T7 364 aaKnown RBP15.94■□□□□ 0.14
TROAP-211ENST00000549891 MUC3AQ02505 3323 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 KIAA1217Q5T5P2 1943 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 CCDC171Q6TFL3 1326 aa15.94■□□□□ 0.14
TROAP-211ENST00000549891 CHD7Q9P2D1 2997 aa15.93■□□□□ 0.14
TROAP-211ENST00000549891 TRIM6-TRIM34B2RNG4 842 aa15.93■□□□□ 0.14
TROAP-211ENST00000549891 PITPNM1O00562 1244 aa15.93■□□□□ 0.14
TROAP-211ENST00000549891 SNHG28P0DPA3 235 aa15.93■□□□□ 0.14
TROAP-211ENST00000549891 CYP2C9P11712 490 aa15.93■□□□□ 0.14
TROAP-211ENST00000549891 EDNRBP24530 442 aa15.93■□□□□ 0.14
TROAP-211ENST00000549891 RRP1P56182 461 aaKnown RBP15.93■□□□□ 0.14
TROAP-211ENST00000549891 HAND2P61296 217 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms