RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 PFASO15067 1338 aa24.37■■□□□ 1.49
VPS29-206ENST00000549578 ZNFX1Q9P2E3 1918 aaKnown RBP24.37■■□□□ 1.49
VPS29-206ENST00000549578 CALML3P27482 149 aa24.36■■□□□ 1.49
VPS29-206ENST00000549578 ANP32AP39687 249 aaKnown RBP24.36■■□□□ 1.49
VPS29-206ENST00000549578 ADCY7P51828 1080 aa24.36■■□□□ 1.49
VPS29-206ENST00000549578 NLRP5P59047 1200 aa24.36■■□□□ 1.49
VPS29-206ENST00000549578 PURBQ96QR8 312 aaKnown RBP24.36■■□□□ 1.49
VPS29-206ENST00000549578 NUDT12Q9BQG2 462 aa24.36■■□□□ 1.49
VPS29-206ENST00000549578 ZMYND12Q9H0C1 365 aa24.36■■□□□ 1.49
VPS29-206ENST00000549578 GABRQQ9UN88 632 aa24.36■■□□□ 1.49
VPS29-206ENST00000549578 ZNF236Q9UL36 1845 aa24.36■■□□□ 1.49
VPS29-206ENST00000549578 ESYT2A0FGR8 921 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 GCOM1H8Y6P7 765 aaPredicted RBP24.35■■□□□ 1.49
VPS29-206ENST00000549578 ADAMTS3O15072 1205 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 COBLO75128 1261 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 POLR2MP0CAP2 368 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 XBP1P17861 261 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 HSD17B4P51659 736 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 PRKCZQ05513 592 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 UBE2SQ16763 222 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 USP17L6PQ6QN14 398 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 SOCS4Q8WXH5 440 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 CUL5Q93034 780 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 RIC8AQ9NPQ8 531 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 DNAJC25-GNG10A0A024R161 153 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 MEIS2O14770 477 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 GUCY1B3Q02153 619 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 CNTN2Q02246 1040 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 GHRHRQ02643 423 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 MAP2K5Q13163 448 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 ARHGEF6Q15052 776 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 SYTL5Q8TDW5 730 aaPredicted RBP24.35■■□□□ 1.49
VPS29-206ENST00000549578 USP6NLQ92738 828 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 C6orf50Q9HD87 102 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 COL20A1Q9P218 1284 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 TRIM17Q9Y577 477 aa24.35■■□□□ 1.49
VPS29-206ENST00000549578 LCTP09848 1927 aa24.34■■□□□ 1.49
VPS29-206ENST00000549578 POTEB2H3BUK9 544 aa24.34■■□□□ 1.49
VPS29-206ENST00000549578 FLT3LGP49771 235 aa24.34■■□□□ 1.49
VPS29-206ENST00000549578 MRPL12P52815 198 aaKnown RBP24.34■■□□□ 1.49
VPS29-206ENST00000549578 OTOP1Q7RTM1 612 aa24.34■■□□□ 1.49
VPS29-206ENST00000549578 DPP9Q86TI2 863 aa24.34■■□□□ 1.49
VPS29-206ENST00000549578 C8orf76Q96K31 380 aa24.34■■□□□ 1.49
VPS29-206ENST00000549578 PHF20Q9BVI0 1012 aa24.34■■□□□ 1.49
VPS29-206ENST00000549578 SRRDQ9UH36 339 aa24.34■■□□□ 1.49
VPS29-206ENST00000549578 KIF3AQ9Y496 699 aa24.34■■□□□ 1.49
VPS29-206ENST00000549578 GNRH1P01148 92 aa24.33■■□□□ 1.49
VPS29-206ENST00000549578 CYP2B6P20813 491 aa24.33■■□□□ 1.49
VPS29-206ENST00000549578 HOXD10P28358 340 aa24.33■■□□□ 1.49
VPS29-206ENST00000549578 TRIM29Q14134 588 aa24.33■■□□□ 1.49
VPS29-206ENST00000549578 FCHSD1Q86WN1 690 aa24.33■■□□□ 1.49
VPS29-206ENST00000549578 FAM133AQ8N9E0 248 aa24.33■■□□□ 1.49
VPS29-206ENST00000549578 PIK3CDO00329 1044 aa24.32■■□□□ 1.48
VPS29-206ENST00000549578 GNA11P29992 359 aa24.32■■□□□ 1.48
VPS29-206ENST00000549578 RGS2P41220 211 aa24.32■■□□□ 1.48
VPS29-206ENST00000549578 NPY5RQ15761 445 aa24.32■■□□□ 1.48
VPS29-206ENST00000549578 KRT40Q6A162 431 aa24.32■■□□□ 1.48
VPS29-206ENST00000549578 NPLOC4Q8TAT6 608 aa24.32■■□□□ 1.48
VPS29-206ENST00000549578 MAF1Q9H063 256 aa24.32■■□□□ 1.48
VPS29-206ENST00000549578 ZNF792Q3KQV3 632 aa24.31■■□□□ 1.48
VPS29-206ENST00000549578 FAM177A1Q8N128 213 aaPredicted RBP24.31■■□□□ 1.48
VPS29-206ENST00000549578 SAMD3Q8N6K7 520 aa24.31■■□□□ 1.48
VPS29-206ENST00000549578 RASGRP4Q8TDF6 673 aa24.31■■□□□ 1.48
VPS29-206ENST00000549578 FGD4Q96M96 766 aa24.31■■□□□ 1.48
VPS29-206ENST00000549578 GLT8D2Q9H1C3 349 aa24.31■■□□□ 1.48
VPS29-206ENST00000549578 TMEM260Q9NX78 707 aa24.31■■□□□ 1.48
VPS29-206ENST00000549578 MAP3K20Q9NYL2 800 aaKnown RBP24.31■■□□□ 1.48
VPS29-206ENST00000549578 BIN2Q9UBW5 565 aaPredicted RBP24.31■■□□□ 1.48
VPS29-206ENST00000549578 PCDHA4Q9UN74 947 aa24.31■■□□□ 1.48
VPS29-206ENST00000549578 PLXNA1Q9UIW2 1896 aa24.31■■□□□ 1.48
VPS29-206ENST00000549578 SOWAHBA6NEL2 793 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 ASTN1O14525 1302 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 FBXO18Q8NFZ0 1043 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 TAAR1Q96RJ0 339 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 APBA2Q99767 749 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 MMP1P03956 469 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 HOXC6P09630 235 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 CLK2P49760 499 aaKnown RBP24.3■■□□□ 1.48
VPS29-206ENST00000549578 JAKMIP3Q5VZ66 844 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 BLIDQ8IZY5 108 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 REXO1Q8N1G1 1221 aaKnown RBP24.3■■□□□ 1.48
VPS29-206ENST00000549578 BICD2Q8TD16 824 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 PGBD1Q96JS3 809 aa24.3■■□□□ 1.48
VPS29-206ENST00000549578 LARP1BQ659C4 914 aaKnown RBP24.29■■□□□ 1.48
VPS29-206ENST00000549578 GALNT17Q6IS24 598 aa24.29■■□□□ 1.48
VPS29-206ENST00000549578 DAGLBQ8NCG7 672 aa24.29■■□□□ 1.48
VPS29-206ENST00000549578 OXER1Q8TDS5 423 aa24.29■■□□□ 1.48
VPS29-206ENST00000549578 MAML3Q96JK9 1138 aa24.29■■□□□ 1.48
VPS29-206ENST00000549578 SLC5A4Q9NY91 659 aa24.29■■□□□ 1.48
VPS29-206ENST00000549578 DDX49Q9Y6V7 483 aaKnown RBP24.29■■□□□ 1.48
VPS29-206ENST00000549578 HTTP42858 3142 aa24.28■■□□□ 1.48
VPS29-206ENST00000549578 CCL14Q16627 93 aa24.28■■□□□ 1.48
VPS29-206ENST00000549578 RMDN3Q96TC7 470 aa24.28■■□□□ 1.48
VPS29-206ENST00000549578 FLRT1Q9NZU1 646 aa24.28■■□□□ 1.48
VPS29-206ENST00000549578 SPDYE3A6NKU9 549 aa24.27■■□□□ 1.48
VPS29-206ENST00000549578 CTU1Q7Z7A3 348 aaKnown RBP24.27■■□□□ 1.48
VPS29-206ENST00000549578 DIS3L2Q8IYB7 885 aaKnown RBP24.27■■□□□ 1.48
VPS29-206ENST00000549578 RAET1EQ8TD07 263 aa24.27■■□□□ 1.48
VPS29-206ENST00000549578 ADD3Q9UEY8 706 aaKnown RBP24.27■■□□□ 1.48
VPS29-206ENST00000549578 PCDHA6Q9UN73 950 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms