RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 MYL3P08590 195 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 FDX1P10109 184 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 ALAS1P13196 640 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 ATP5JP18859 108 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 MRE11P49959 708 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 PURAQ00577 322 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 IKQ13123 557 aaPredicted RBP12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 GJD3Q8N144 294 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 STRBPQ96SI9 672 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 POLR3EQ9NVU0 708 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
TRAFD1-206ENST00000549358 LCHNA4D1U4 455 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 GSG1L2A8MUP6 293 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 TTLL1O95922 423 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 CPT1AP50416 773 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 STAT2P52630 851 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 SNAP25P60880 206 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 NBPF20Q3BBV1 942 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 DUSP28Q4G0W2 176 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 MUM1L1Q5H9M0 696 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 ZSCAN25Q6NSZ9 544 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 TMCO2Q7Z6W1 182 aaPredicted RBP12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 RPAP2Q8IXW5 612 aaPredicted RBP12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 GDPD5Q8WTR4 605 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 ZBED2Q9BTP6 218 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 WDR11Q9BZH6 1224 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 VTA1Q9NP79 307 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 CYP39A1Q9NYL5 469 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 MCM3APO60318 1980 aa12.87□□□□□ -0.35
TRAFD1-206ENST00000549358 SSTR3P32745 418 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 KCNJ6P48051 423 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 CSPP1Q1MSJ5 1256 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 TKFCQ3LXA3 575 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 NSMFQ6X4W1 530 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 FAM178BQ8IXR5 827 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 CHURC1Q8WUH1 139 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 STAG1Q8WVM7 1258 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 LMCD1Q9NZU5 365 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 SYNPO2Q9UMS6 1093 aa12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 GREB1LQ9C091 1923 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-206ENST00000549358 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 BAIAP3O94812 1187 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 ALADP13716 330 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 KCNA5P22460 613 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 MCCP23508 829 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 SLC1A4P43007 532 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 CHMP4BP1P59074 171 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 BFSP2Q13515 415 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 GIMAP6Q6P9H5 292 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 FAM160B2Q86V87 743 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 OR6J1Q8NGC5 347 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 MORC4Q8TE76 937 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 UBE2ZQ9H832 354 aaPredicted RBP12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 SUGCTQ9HAC7 445 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 MYO9BQ13459 2157 aa12.85□□□□□ -0.35
TRAFD1-206ENST00000549358 PRRC2BQ5JSZ5 2229 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 APPP05067 770 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 TSPY3P0CV98 308 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 TSPY8P0CW00 308 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 IL9P15248 144 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 TDO2P48775 406 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 CLCN6P51797 869 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 WDR5P61964 334 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 LEXMQ3ZCV2 418 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 NFRKBQ6P4R8 1299 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 GMCL1Q96IK5 515 aa12.84□□□□□ -0.35
TRAFD1-206ENST00000549358 RAB11FIP3O75154 756 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 DEFB103AP81534 67 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 TFAP4Q01664 338 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 NHLH1Q02575 133 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 BAATQ14032 418 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 BRDTQ58F21 947 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 PTCRAQ6ISU1 281 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 KCTD1Q719H9 257 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 NEDD1Q8NHV4 660 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 ADD3Q9UEY8 706 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 CCPG1Q9ULG6 757 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 PRR12Q9ULL5 1215 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 NCOR1O75376 2440 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 SCN5AQ14524 2016 aa12.83□□□□□ -0.36
TRAFD1-206ENST00000549358 RBM47A0AV96 593 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 KPNA6O60684 536 aa12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 HMMRO75330 724 aa12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 ALDH5A1P51649 535 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 PTPN11Q06124 597 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 GPNMBQ14956 572 aa12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 PTGISQ16647 500 aa12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 RCSD1Q6JBY9 416 aa12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 SIRT2Q8IXJ6 389 aa12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 OSBP2Q969R2 916 aa12.82□□□□□ -0.36
TRAFD1-206ENST00000549358 FBXL18Q96ME1 805 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 344.7 ms