RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 C5orf42Q9H799 3197 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 SOWAHBA6NEL2 793 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 GRXCR2A6NFK2 248 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 GSG1L2A8MUP6 293 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 NDUFB10O96000 172 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 IQCF3P0C7M6 154 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 TMEM63BQ5T3F8 832 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 IQSEC1Q6DN90 963 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 PTCRAQ6ISU1 281 aaPredicted RBP14.51□□□□□ -0.09
DDX54-206ENST00000549271 TAPT1Q6NXT6 567 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 NYAP2Q9P242 653 aa14.51□□□□□ -0.09
DDX54-206ENST00000549271 ZNF536O15090 1300 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 ASB14A6NK59 587 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 F5H6K3 240 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 BAIAP3O94812 1187 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 ZFYP08048 801 aaPredicted RBP14.5□□□□□ -0.09
DDX54-206ENST00000549271 RASA1P20936 1047 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 KCNA5P22460 613 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 KLRC3Q07444 240 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 TSHZ3Q63HK5 1081 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 APPBP2Q92624 585 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 SUGCTQ9HAC7 445 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 A1CFQ9NQ94 594 aaKnown RBP14.5□□□□□ -0.09
DDX54-206ENST00000549271 PDGFCQ9NRA1 345 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 SYNPO2Q9UMS6 1093 aa14.5□□□□□ -0.09
DDX54-206ENST00000549271 IGKV6D-41A0A0C4DH26 115 aa14.49□□□□□ -0.09
DDX54-206ENST00000549271 GNAT2P19087 354 aa14.49□□□□□ -0.09
DDX54-206ENST00000549271 OTUD7AQ8TE49 926 aaPredicted RBP14.49□□□□□ -0.09
DDX54-206ENST00000549271 ANKS1AQ92625 1134 aa14.49□□□□□ -0.09
DDX54-206ENST00000549271 OSBP2Q969R2 916 aa14.49□□□□□ -0.09
DDX54-206ENST00000549271 KIFC2Q96AC6 838 aa14.49□□□□□ -0.09
DDX54-206ENST00000549271 GPATCH3Q96I76 525 aa14.49□□□□□ -0.09
DDX54-206ENST00000549271 PHOX2BQ99453 314 aa14.49□□□□□ -0.09
DDX54-206ENST00000549271 FTOQ9C0B1 505 aaKnown RBP eCLIP14.49□□□□□ -0.09
DDX54-206ENST00000549271 CTDP1Q9Y5B0 961 aaPredicted RBP14.49□□□□□ -0.09
DDX54-206ENST00000549271 DDX49Q9Y6V7 483 aaKnown RBP14.49□□□□□ -0.09
DDX54-206ENST00000549271 RNF113AO15541 343 aaKnown RBP14.48□□□□□ -0.09
DDX54-206ENST00000549271 ERVK-21P61565 698 aa14.48□□□□□ -0.09
DDX54-206ENST00000549271 WDR5P61964 334 aaKnown RBP14.48□□□□□ -0.09
DDX54-206ENST00000549271 PURAQ00577 322 aaKnown RBP14.48□□□□□ -0.09
DDX54-206ENST00000549271 HDAC1Q13547 482 aaPredicted RBP14.48□□□□□ -0.09
DDX54-206ENST00000549271 PUS10Q3MIT2 529 aaKnown RBP14.48□□□□□ -0.09
DDX54-206ENST00000549271 HFE2Q6ZVN8 426 aa14.48□□□□□ -0.09
DDX54-206ENST00000549271 NEK9Q8TD19 979 aa14.48□□□□□ -0.09
DDX54-206ENST00000549271 MKL1Q969V6 931 aa14.48□□□□□ -0.09
DDX54-206ENST00000549271 ACAD9Q9H845 621 aa14.48□□□□□ -0.09
DDX54-206ENST00000549271 MKNK2Q9HBH9 465 aa14.48□□□□□ -0.09
DDX54-206ENST00000549271 HOMER2Q9NSB8 354 aa14.48□□□□□ -0.09
DDX54-206ENST00000549271 POLR3EQ9NVU0 708 aa14.48□□□□□ -0.09
DDX54-206ENST00000549271 FEM1BQ9UK73 627 aa14.48□□□□□ -0.09
DDX54-206ENST00000549271 FBXO16Q8IX29 292 aaPredicted RBP14.47□□□□□ -0.09
DDX54-206ENST00000549271 RETREG2Q8NC44 543 aa14.47□□□□□ -0.09
DDX54-206ENST00000549271 ZNF287Q9HBT7 754 aa14.47□□□□□ -0.09
DDX54-206ENST00000549271 EPB41L4AQ9HCS5 686 aaPredicted RBP14.47□□□□□ -0.09
DDX54-206ENST00000549271 ZDBF2Q9HCK1 2354 aa14.47□□□□□ -0.09
DDX54-206ENST00000549271 CACNA1AO00555 2505 aa14.47□□□□□ -0.09
DDX54-206ENST00000549271 SALL3Q9BXA9 1300 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 TECTAO75443 2155 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 C19orf67A6NJJ6 358 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 MINDY4BA8MYZ0 360 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 PATL2C9JE40 543 aaKnown RBP14.46□□□□□ -0.09
DDX54-206ENST00000549271 GPAA1O43292 621 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 ST18O60284 1047 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 KCNJ6P48051 423 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 ZP2Q05996 745 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 AAMPQ13685 434 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 LRRFIP1Q32MZ4 808 aaKnown RBP14.46□□□□□ -0.09
DDX54-206ENST00000549271 DUSP28Q4G0W2 176 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 EEPD1Q7L9B9 569 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 TMCO2Q7Z6W1 182 aaPredicted RBP14.46□□□□□ -0.09
DDX54-206ENST00000549271 EXOC6Q8TAG9 804 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 PI4K2BQ8TCG2 481 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 MORC4Q8TE76 937 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 TGS1Q96RS0 853 aaKnown RBP14.46□□□□□ -0.09
DDX54-206ENST00000549271 VTA1Q9NP79 307 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 MTUS1Q9ULD2 1270 aa14.46□□□□□ -0.09
DDX54-206ENST00000549271 TTC41PQ6P2S7 1318 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 FDX1P10109 184 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 DEFB103AP81534 67 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 BFSP2Q13515 415 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 GPNMBQ14956 572 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 NBPF20Q3BBV1 942 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 ANKRD45Q5TZF3 282 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 NFRKBQ6P4R8 1299 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 ZNF444Q8N0Y2 327 aaPredicted RBP14.45□□□□□ -0.1
DDX54-206ENST00000549271 GMCL1P1Q8NEA9 526 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 MFSD14AQ96MC6 490 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 RAD9AQ99638 391 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 MTG1Q9BT17 334 aaPredicted RBP14.45□□□□□ -0.1
DDX54-206ENST00000549271 ZBED2Q9BTP6 218 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 RNF146Q9NTX7 359 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 MTMR4Q9NYA4 1195 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 CLIP2Q9UDT6 1046 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 PRKAG3Q9UGI9 489 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 SUPT16HQ9Y5B9 1047 aaKnown RBP14.45□□□□□ -0.1
DDX54-206ENST00000549271 SPTBN4Q9H254 2564 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 PLIN4Q96Q06 1357 aa14.45□□□□□ -0.1
DDX54-206ENST00000549271 LINC01553A4QN01 128 aa14.44□□□□□ -0.1
DDX54-206ENST00000549271 GJB5O95377 273 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms