RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 PCDHA4Q9UN74 947 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 PPP1R3GB7ZBB8 358 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L15C9J2P7 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L10C9JJH3 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L13C9JLJ4 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L12C9JPN9 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L11C9JVI0 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L21D6R901 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L18D6R9N7 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L22D6RA61 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L17D6RBQ6 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L19D6RCP7 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L20D6RJB6 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 ZNF213O14771 459 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 CUTAO60888 179 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 F13A1P00488 732 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 HOXA13P31271 388 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-212ENST00000549162 IRX6P78412 446 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-212ENST00000549162 USP17L24Q0WX57 530 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 ADALQ6DHV7 355 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 TTLL5Q6EMB2 1281 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 NIM1KQ8IY84 436 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 SH3RF3Q8TEJ3 882 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-212ENST00000549162 CLP1Q92989 425 aaKnown RBP5.64□□□□□ -1.51
SCAF11-212ENST00000549162 FGD4Q96M96 766 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 PPP1R9BQ96SB3 815 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 SCAND2PQ9GZW5 306 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-212ENST00000549162 PDRG1Q9NUG6 133 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 ZSWIM5Q9P217 1185 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 STK17AQ9UEE5 414 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 SERPINB13Q9UIV8 391 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 SLC9C2Q5TAH2 1124 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 KRT25Q7Z3Z0 450 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 FANCBQ8NB91 859 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 JAKMIP2Q96AA8 810 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 VTI1AQ96AJ9 217 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 NIFKQ9BYG3 293 aaKnown RBP5.64□□□□□ -1.51
SCAF11-212ENST00000549162 LMBRD1Q9NUN5 540 aa5.64□□□□□ -1.51
SCAF11-212ENST00000549162 MICAL3Q7RTP6 2002 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 PSMD14O00487 310 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 WNT10BO00744 389 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 USP2O75604 605 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 ASNSP08243 561 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 TGFB3P10600 412 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 GCLCP48506 637 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 NOP9Q86U38 636 aaKnown RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 SLAIN1Q8ND83 568 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 EPAS1Q99814 870 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 C7orf25Q9BPX7 421 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 TMA7Q9Y2S6 64 aaKnown RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 LAS1LQ9Y4W2 734 aaKnown RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 PCDHA2Q9Y5H9 948 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 FAM196BA6NMK8 535 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 PRKAR2AP13861 404 aaKnown RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 CDC25AP30304 524 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 SLC26A2P50443 739 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 TIMM10P62072 90 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 ZNF211Q13398 564 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 ADCK5Q3MIX3 580 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 FAM184AQ8NB25 1140 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 TTC13Q8NBP0 860 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 GIMAP8Q8ND71 665 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 KCNG4Q8TDN1 519 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 TSC1Q92574 1164 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 SYT17Q9BSW7 474 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 ANO2Q9NQ90 1003 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 CEP72Q9P209 647 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 KLHL42Q9P2K6 505 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 FBXO40Q9UH90 709 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 FBXO2Q9UK22 296 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 ZBTB21Q9ULJ3 1066 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 AGTPBP1Q9UPW5 1226 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 BTNL10A8MVZ5 291 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 BHMG1C9JSJ3 638 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 HAS3O00219 553 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 MBD4O95243 580 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 SNW1Q13573 536 aaKnown RBP5.63□□□□□ -1.51
SCAF11-212ENST00000549162 TAF7LQ5H9L4 462 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 ZNF654Q8IZM8 581 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 TINF2Q9BSI4 451 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 FSD1Q9BTV5 496 aa5.63□□□□□ -1.51
SCAF11-212ENST00000549162 PVALEFA0A1B0GWK0 134 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 TTLL13PA6NNM8 815 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 H3BRB1 525 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 TUBB4AP04350 444 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 YBX3P16989 372 aaKnown RBP eCLIP5.62□□□□□ -1.518e-7■□□□□ 10.9
SCAF11-212ENST00000549162 MRPL58Q14197 206 aaKnown RBP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 XKR4Q5GH76 650 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 DPY19L2P1Q6NXN4 242 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 TAF1DQ9H5J8 278 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 TUT1Q9H6E5 874 aaKnown RBP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 KBTBD4Q9NVX7 518 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 VAV3Q9UKW4 847 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 MAFFQ9ULX9 164 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 ZBTB5O15062 677 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 EIF3DO15371 548 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCAF11-212ENST00000549162 ADAM17P78536 824 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 PTK7Q13308 1070 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 GRB14Q14449 540 aa5.62□□□□□ -1.51
SCAF11-212ENST00000549162 GRIK5Q16478 980 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms