RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 CCDC144BQ3MJ40 725 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 PRPF38AQ8NAV1 312 aaKnown RBP18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 ANKS1AQ92625 1134 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 DDX11Q96FC9 970 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 SLF1Q9BQI6 1058 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 ZKSCAN3Q9BRR0 538 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 PPP1R12CQ9BZL4 782 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 KATNBL1Q9H079 304 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 NKX2-4Q9H2Z4 354 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 ABHD16BQ9H3Z7 469 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 MSRAQ9UJ68 235 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 FEM1BQ9UK73 627 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 BRWD1Q9NSI6 2320 aa18.43■□□□□ 0.54
CHMP1A-206ENST00000549139 E7EWF7 191 aa18.42■□□□□ 0.54
CHMP1A-206ENST00000549139 IGFBP4P22692 258 aa18.42■□□□□ 0.54
CHMP1A-206ENST00000549139 MCCP23508 829 aa18.42■□□□□ 0.54
CHMP1A-206ENST00000549139 CYP2C18P33260 490 aa18.42■□□□□ 0.54
CHMP1A-206ENST00000549139 SLC1A4P43007 532 aa18.42■□□□□ 0.54
CHMP1A-206ENST00000549139 SLC43A3Q8NBI5 491 aa18.42■□□□□ 0.54
CHMP1A-206ENST00000549139 NCOA7Q8NI08 942 aa18.42■□□□□ 0.54
CHMP1A-206ENST00000549139 ZSCAN10Q96SZ4 725 aaPredicted RBP18.42■□□□□ 0.54
CHMP1A-206ENST00000549139 PLA2G6O60733 806 aa18.41■□□□□ 0.54
CHMP1A-206ENST00000549139 BMP1P13497 986 aa18.41■□□□□ 0.54
CHMP1A-206ENST00000549139 GNASQ5JWF2 1037 aa18.41■□□□□ 0.54
CHMP1A-206ENST00000549139 CHURC1Q8WUH1 139 aa18.41■□□□□ 0.54
CHMP1A-206ENST00000549139 DCAF4Q8WV16 495 aa18.41■□□□□ 0.54
CHMP1A-206ENST00000549139 NECAB3Q96P71 396 aaPredicted RBP18.41■□□□□ 0.54
CHMP1A-206ENST00000549139 TMEM232C9JQI7 657 aa18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 TLR3O15455 904 aaKnown RBP18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 FDX1P10109 184 aa18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 FAM160B2Q86V87 743 aa18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 VTI1AQ96AJ9 217 aa18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 FAM122AQ96E09 287 aa18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 SLC28A3Q9HAS3 691 aa18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 SPC25Q9HBM1 224 aa18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 TAF6LQ9Y6J9 622 aa18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 UMODL1Q5DID0 1318 aa18.4■□□□□ 0.54
CHMP1A-206ENST00000549139 SLC27A2O14975 620 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 FGBP02675 491 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 STAT2P52630 851 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 CREB3L3Q68CJ9 461 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 STOX1Q6ZVD7 989 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 CYB5R4Q7L1T6 521 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 ARMCX2Q7L311 632 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 RALYLQ86SE5 291 aaKnown RBP18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 ENAHQ8N8S7 591 aaPredicted RBP18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 VWCEQ96DN2 955 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 UBAC1Q9BSL1 405 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 ASTN1O14525 1302 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 TNKSO95271 1327 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 MUC6Q6W4X9 2439 aa18.39■□□□□ 0.53
CHMP1A-206ENST00000549139 ZBED4O75132 1171 aa18.38■□□□□ 0.53
CHMP1A-206ENST00000549139 BEX3Q00994 111 aa18.38■□□□□ 0.53
CHMP1A-206ENST00000549139 SEC23AQ15436 765 aa18.38■□□□□ 0.53
CHMP1A-206ENST00000549139 RNF20Q5VTR2 975 aa18.38■□□□□ 0.53
CHMP1A-206ENST00000549139 KCTD1Q719H9 257 aa18.38■□□□□ 0.53
CHMP1A-206ENST00000549139 CPXCR1Q8N123 301 aa18.38■□□□□ 0.53
CHMP1A-206ENST00000549139 KIFC2Q96AC6 838 aa18.38■□□□□ 0.53
CHMP1A-206ENST00000549139 MTIF3Q9H2K0 278 aaKnown RBP18.38■□□□□ 0.53
CHMP1A-206ENST00000549139 SLC38A10Q9HBR0 1119 aa18.38■□□□□ 0.53
CHMP1A-206ENST00000549139 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 SNHG28P0DPA3 235 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 PDHBP11177 359 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 HOXD11P31277 338 aaPredicted RBP18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 CXCL17Q6UXB2 119 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 BTNL9Q6UXG8 535 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 OTOP2Q7RTS6 562 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 CCDC144CPQ8IYA2 1237 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 PNMA1Q8ND90 353 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 MTA3Q9BTC8 594 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 HIPK3Q9H422 1215 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 KAT14Q9H8E8 782 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 RAVER2Q9HCJ3 691 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 MTMR7Q9Y216 660 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 GNEQ9Y223 722 aaKnown RBP18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 GRIN2DO15399 1336 aa18.37■□□□□ 0.53
CHMP1A-206ENST00000549139 MYH6P13533 1939 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 RABGGTBP53611 331 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 TFF2Q03403 129 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 CCDC96Q2M329 555 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 TSGA10IPQ3SY00 556 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 IFIT1BQ5T764 474 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 MB21D2Q8IYB1 491 aaPredicted RBP18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 ANKRD35Q8N283 1001 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 CHST13Q8NET6 341 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 IL27Q8NEV9 243 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 CHMP4CQ96CF2 233 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 NOC4LQ9BVI4 516 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 C1QTNF1Q9BXJ1 281 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 WNT8AQ9H1J5 351 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 FBXO40Q9UH90 709 aa18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 ISY1Q9ULR0 285 aaKnown RBP18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 CTDP1Q9Y5B0 961 aaPredicted RBP18.36■□□□□ 0.53
CHMP1A-206ENST00000549139 ERICH2A1L162 156 aa18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 EPB41L2O43491 1005 aaKnown RBP18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 REC8O95072 547 aa18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 MYOGP15173 224 aa18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 OAZ1P54368 228 aa18.35■□□□□ 0.53
CHMP1A-206ENST00000549139 ZNF543Q08ER8 600 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms