RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 FBXO11Q86XK2 927 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 MB21D2Q8IYB1 491 aaPredicted RBP17.12■□□□□ 0.33
LINC00661-203ENST00000549131 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 JMJD4Q9H9V9 463 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 SENP2Q9HC62 589 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 PDLIM7Q9NR12 457 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 PDGFCQ9NRA1 345 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 MAD2L2Q9UI95 211 aa17.12■□□□□ 0.33
LINC00661-203ENST00000549131 LOC102724159A0A0B4J2E5 919 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 ASGR1P07306 291 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 SMPD1P17405 629 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 ANTXR2P58335 489 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 BEX3Q00994 111 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 TLE2Q04725 743 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 GRM4Q14833 912 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 PWP2Q15269 919 aaKnown RBP17.11■□□□□ 0.33
LINC00661-203ENST00000549131 CCSAPQ6IQ19 270 aaPredicted RBP17.11■□□□□ 0.33
LINC00661-203ENST00000549131 TDHQ8IZJ6 230 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 MORC4Q8TE76 937 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 AP5M1Q9H0R1 490 aa17.11■□□□□ 0.33
LINC00661-203ENST00000549131 CLTBP09497 229 aa17.1■□□□□ 0.33
LINC00661-203ENST00000549131 PTGS1P23219 599 aa17.1■□□□□ 0.33
LINC00661-203ENST00000549131 TAPT1Q6NXT6 567 aa17.1■□□□□ 0.33
LINC00661-203ENST00000549131 CASC1Q6TDU7 716 aa17.1■□□□□ 0.33
LINC00661-203ENST00000549131 CATIPQ7Z7H3 387 aa17.1■□□□□ 0.33
LINC00661-203ENST00000549131 HOMER1Q86YM7 354 aa17.1■□□□□ 0.33
LINC00661-203ENST00000549131 DNERQ8NFT8 737 aa17.1■□□□□ 0.33
LINC00661-203ENST00000549131 VTI1AQ96AJ9 217 aa17.1■□□□□ 0.33
LINC00661-203ENST00000549131 GNEQ9Y223 722 aaKnown RBP17.1■□□□□ 0.33
LINC00661-203ENST00000549131 PALM3A6NDB9 673 aaPredicted RBP17.09■□□□□ 0.33
LINC00661-203ENST00000549131 SLC27A2O14975 620 aa17.09■□□□□ 0.33
LINC00661-203ENST00000549131 PRC1O43663 620 aa17.09■□□□□ 0.33
LINC00661-203ENST00000549131 CDC45O75419 566 aa17.09■□□□□ 0.33
LINC00661-203ENST00000549131 NEFLP07196 543 aa17.09■□□□□ 0.33
LINC00661-203ENST00000549131 FSCN1Q16658 493 aaKnown RBP17.09■□□□□ 0.33
LINC00661-203ENST00000549131 IQSEC1Q6DN90 963 aa17.09■□□□□ 0.33
LINC00661-203ENST00000549131 SH3RF1Q7Z6J0 888 aa17.09■□□□□ 0.33
LINC00661-203ENST00000549131 MCF2L2Q86YR7 1114 aa17.09■□□□□ 0.33
LINC00661-203ENST00000549131 AMNQ9BXJ7 453 aa17.09■□□□□ 0.33
LINC00661-203ENST00000549131 MRPL11Q9Y3B7 192 aaKnown RBP17.09■□□□□ 0.33
LINC00661-203ENST00000549131 MYH7BA7E2Y1 1941 aa17.08■□□□□ 0.33
LINC00661-203ENST00000549131 ELP1O95163 1332 aa17.08■□□□□ 0.32
LINC00661-203ENST00000549131 MROH7Q68CQ1 1323 aa17.08■□□□□ 0.32
LINC00661-203ENST00000549131 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
LINC00661-203ENST00000549131 B4DLN1 442 aa17.08■□□□□ 0.32
LINC00661-203ENST00000549131 SOX1O00570 391 aaPredicted RBP17.08■□□□□ 0.32
LINC00661-203ENST00000549131 ZBTB5O15062 677 aa17.08■□□□□ 0.32
LINC00661-203ENST00000549131 CTAGE5O15320 804 aa17.08■□□□□ 0.32
LINC00661-203ENST00000549131 DYNC1LI2O43237 492 aaPredicted RBP17.08■□□□□ 0.32
LINC00661-203ENST00000549131 MRPL12P52815 198 aaKnown RBP17.08■□□□□ 0.32
LINC00661-203ENST00000549131 TMEM63BQ5T3F8 832 aa17.08■□□□□ 0.32
LINC00661-203ENST00000549131 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
LINC00661-203ENST00000549131 RGS22Q8NE09 1264 aa17.08■□□□□ 0.32
LINC00661-203ENST00000549131 TRIM43BA6NCK2 446 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 DCDC2CA8MYV0 355 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 CFBP00751 764 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 EDNRBP24530 442 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 MCM5P33992 734 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 TROAPQ12815 778 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 PPP2R5BQ15173 497 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 DUSP28Q4G0W2 176 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 CXCL17Q6UXB2 119 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 NFXL1Q6ZNB6 911 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 SYTL5Q8TDW5 730 aaPredicted RBP17.07■□□□□ 0.32
LINC00661-203ENST00000549131 IGDCC4Q8TDY8 1250 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 TBC1D5Q92609 795 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 BADQ92934 168 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 TRIM43Q96BQ3 446 aaPredicted RBP17.07■□□□□ 0.32
LINC00661-203ENST00000549131 LRCH3Q96II8 777 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 PIGSQ96S52 555 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 MYL10Q9BUA6 226 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 WDR11Q9BZH6 1224 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 LY9Q9HBG7 655 aa17.07■□□□□ 0.32
LINC00661-203ENST00000549131 ZEB2O60315 1214 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 PPP1R11O60927 126 aaPredicted RBP17.06■□□□□ 0.32
LINC00661-203ENST00000549131 DDAH1O94760 285 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 NKX3-2P78367 333 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 SLC35G1Q2M3R5 365 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 RNF20Q5VTR2 975 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 ANKRD33Q7Z3H0 272 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 CTCFLQ8NI51 663 aaPredicted RBP17.06■□□□□ 0.32
LINC00661-203ENST00000549131 SCFD2Q8WU76 684 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 MTMR8Q96EF0 704 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 TAAR1Q96RJ0 339 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 MAF1Q9H063 256 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 GPHNQ9NQX3 736 aaPredicted RBP17.06■□□□□ 0.32
LINC00661-203ENST00000549131 TMEM39AQ9NV64 488 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 COL20A1Q9P218 1284 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 Q9Y3F1 56 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 PCDHA1Q9Y5I3 950 aa17.06■□□□□ 0.32
LINC00661-203ENST00000549131 CCDC69A6NI79 296 aa17.05■□□□□ 0.32
LINC00661-203ENST00000549131 SH2B2O14492 632 aaPredicted RBP17.05■□□□□ 0.32
LINC00661-203ENST00000549131 RAG1P15918 1043 aa17.05■□□□□ 0.32
LINC00661-203ENST00000549131 NECTIN1Q15223 517 aa17.05■□□□□ 0.32
LINC00661-203ENST00000549131 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
LINC00661-203ENST00000549131 NSUN6Q8TEA1 469 aaKnown RBP17.05■□□□□ 0.32
LINC00661-203ENST00000549131 PIBF1Q8WXW3 757 aa17.05■□□□□ 0.32
LINC00661-203ENST00000549131 TMEM87BQ96K49 555 aa17.05■□□□□ 0.32
LINC00661-203ENST00000549131 TOX2Q96NM4 488 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms