RNA–Protein interactions for RNA: ENST00000548824.5

RACGAP1-215, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 586 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-215ENST00000548824 MAP3K20Q9NYL2 800 aaKnown RBP13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 MRPL11Q9Y3B7 192 aaKnown RBP13.21□□□□□ -0.29
RACGAP1-215ENST00000548824 DLL1O00548 723 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 KDM4AO75164 1064 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 PARP1P09874 1014 aaKnown RBP13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 SNHG28P0DPA3 235 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 SNAP25P60880 206 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 TTLL4Q14679 1199 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 IFIT1BQ5T764 474 aaKnown RBP13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 TTBK2Q6IQ55 1244 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 EEPD1Q7L9B9 569 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 LENG1Q96BZ8 264 aaPredicted RBP13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 FGD4Q96M96 766 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 IWS1Q96ST2 819 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 KATNBL1Q9H079 304 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 SEMA6BQ9H3T3 888 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 DNAH12Q6ZR08 3092 aa13.2□□□□□ -0.3
RACGAP1-215ENST00000548824 IGHDP01880 384 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 FGBP02675 491 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 PFKMP08237 780 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 SMPD1P17405 629 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 BEX3Q00994 111 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 PPP2R5BQ15173 497 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 C9orf50Q5SZB4 431 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 TAPT1Q6NXT6 567 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 CXCL17Q6UXB2 119 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 FAM126BQ8IXS8 530 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 OR6J1Q8NGC5 347 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 NSUN6Q8TEA1 469 aaKnown RBP13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 HIPK3Q9H422 1215 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 ZSWIM5Q9P217 1185 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 MSRAQ9UJ68 235 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 TBX21Q9UL17 535 aa13.19□□□□□ -0.3
RACGAP1-215ENST00000548824 SZT2Q5T011 3432 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 RBM47A0AV96 593 aaKnown RBP13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 CD4P01730 458 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 RPS6P62753 249 aaKnown RBP13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 PTPN11Q06124 597 aaPredicted RBP13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 RAB30Q15771 203 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 STXBP2Q15833 593 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 KCNV1Q6PIU1 500 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 FBXO11Q86XK2 927 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 FBXO16Q8IX29 292 aaPredicted RBP13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 CCDC155Q8N6L0 562 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 SLC43A3Q8NBI5 491 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 RETREG2Q8NC44 543 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 EXOC6Q8TAG9 804 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 ZKSCAN3Q9BRR0 538 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 IL23AQ9NPF7 189 aa13.18□□□□□ -0.3
RACGAP1-215ENST00000548824 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 B4E1Z4 1266 aa13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 NFIBO00712 420 aa13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 TXNP10599 105 aaKnown RBP13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 ACTN1P12814 892 aa13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 USH1GQ495M9 461 aa13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 RALYLQ86SE5 291 aaKnown RBP13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 AMNQ9BXJ7 453 aa13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 PDGFCQ9NRA1 345 aa13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 NOD1Q9Y239 953 aa13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 MYH6P13533 1939 aa13.17□□□□□ -0.3
RACGAP1-215ENST00000548824 TNKSO95271 1327 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 MYL3P08590 195 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 FOSL2P15408 326 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 CSF2RAP15509 400 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 RFC2P35250 354 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 CDC37Q16543 378 aaPredicted RBP13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 ARHGEF16Q5VV41 709 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 NFRKBQ6P4R8 1299 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 ADGRF4Q8IZF3 695 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 GAS2L1Q99501 681 aaPredicted RBP13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 CDX2Q99626 313 aaPredicted RBP13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 PPP1R12CQ9BZL4 782 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 UBA5Q9GZZ9 404 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 VAT1LQ9HCJ6 419 aa13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 SUPT16HQ9Y5B9 1047 aaKnown RBP13.16□□□□□ -0.3
RACGAP1-215ENST00000548824 CTAGE5O15320 804 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 ADCY6O43306 1168 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 PARNO95453 639 aaKnown RBP13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 GH1P01241 217 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 GOLGA8HP0CJ92 632 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 ITGB8P26012 769 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 BFSP2Q13515 415 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 FAM47CQ5HY64 1035 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 TMEM240Q5SV17 173 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 ZNF365Q70YC5 407 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 ENAHQ8N8S7 591 aaPredicted RBP13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 NCOA7Q8NI08 942 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 HERVK_113Q902F9 699 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 SYMPKQ92797 1274 aaKnown RBP13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 TIFAQ96CG3 184 aa13.15□□□□□ -0.3
RACGAP1-215ENST00000548824 RMDN3Q96TC7 470 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms