RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 CLEC1BQ9P126 229 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 NDOR1Q9UHB4 597 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 TRAF6Q9Y4K3 522 aa5.87□□□□□ -1.47
PTCH1-216ENST00000548379 SSU72P8A0A1W2PR75 194 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 TCRBV16S1A1N1A0A5B0 115 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 KIAA1324LA8MWY0 1029 aaPredicted RBP5.86□□□□□ -1.47
PTCH1-216ENST00000548379 AQP7O14520 342 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 IRS4O14654 1257 aaPredicted RBP5.86□□□□□ -1.47
PTCH1-216ENST00000548379 FKTNO75072 461 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 POU3F3P20264 500 aaPredicted RBP5.86□□□□□ -1.47
PTCH1-216ENST00000548379 STAT3P40763 770 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 CD97P48960 835 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 GPR85P60893 370 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 BNIP3Q12983 259 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 INF2Q27J81 1249 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 MBLAC2Q68D91 279 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 SPRED2Q7Z698 418 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 RNF180Q86T96 592 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 RCBTB1Q8NDN9 531 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.86□□□□□ -1.47
PTCH1-216ENST00000548379 LINC01599Q8WXQ3 324 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 PHF20Q9BVI0 1012 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 CDADC1Q9BWV3 514 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 EBF1Q9UH73 591 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 COL4A3BPQ9Y5P4 624 aa5.86□□□□□ -1.47
PTCH1-216ENST00000548379 NPHP3-ACAD11A0A0J9YXS1 232 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 FADS2P1A8MWK0 482 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 ARVCFO00192 962 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 MSCO60682 206 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 ASLP04424 464 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 CD8BP10966 210 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 MYCLP1P12525 358 aaPredicted RBP5.85□□□□□ -1.47
PTCH1-216ENST00000548379 LCP1P13796 627 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 KCNA6P17658 529 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 CD96P40200 585 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 WAPLQ7Z5K2 1190 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 LRRTM3Q86VH5 581 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 IFNL3Q8IZI9 196 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 ZCRB1Q8TBF4 217 aaKnown RBP5.85□□□□□ -1.47
PTCH1-216ENST00000548379 DDX1Q92499 740 aaKnown RBP5.85□□□□□ -1.47
PTCH1-216ENST00000548379 DIO2Q92813 273 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 MAP6Q96JE9 813 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 TARS2Q9BW92 718 aaKnown RBP5.85□□□□□ -1.47
PTCH1-216ENST00000548379 MAPRE3Q9UPY8 281 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 SLC5A6Q9Y289 635 aa5.85□□□□□ -1.47
PTCH1-216ENST00000548379 NOP58Q9Y2X3 529 aaKnown RBP5.85□□□□□ -1.47
PTCH1-216ENST00000548379 WNT9AO14904 365 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 PDE8AO60658 829 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 RASGRP1O95267 797 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 CRTAMO95727 393 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 ZGLP1P0C6A0 271 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 NAT1P18440 290 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 RPL10P27635 214 aaKnown RBP5.84□□□□□ -1.47
PTCH1-216ENST00000548379 IKZF1Q13422 519 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 ANGEL2Q5VTE6 544 aaKnown RBP5.84□□□□□ -1.47
PTCH1-216ENST00000548379 LBX2Q6XYB7 198 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 VSIG10LQ86VR7 867 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 ANKRD13AQ8IZ07 590 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 HHIPL1Q96JK4 782 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 MAGEB10Q96LZ2 347 aaPredicted RBP5.84□□□□□ -1.47
PTCH1-216ENST00000548379 ORAI3Q9BRQ5 295 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 CDIP1Q9H305 208 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 CAAP1Q9H8G2 361 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 CARS2Q9HA77 564 aaKnown RBP5.84□□□□□ -1.47
PTCH1-216ENST00000548379 TNFRSF10DQ9UBN6 386 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 CCDC39Q9UFE4 941 aa5.84□□□□□ -1.47
PTCH1-216ENST00000548379 TNPO3Q9Y5L0 923 aaKnown RBP5.84□□□□□ -1.47
PTCH1-216ENST00000548379 C7orf72A4D263 438 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 NPTXRO95502 500 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 TBC1D8O95759 1140 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 HSP90B1P14625 803 aaKnown RBP5.83□□□□□ -1.48
PTCH1-216ENST00000548379 IGFALSP35858 605 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 KIR2DL1P43626 348 aaPredicted RBP5.83□□□□□ -1.48
PTCH1-216ENST00000548379 KIR2DL2P43627 348 aaPredicted RBP5.83□□□□□ -1.48
PTCH1-216ENST00000548379 ZNF460Q14592 562 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 HLA-DQA1Q5Y7H0 255 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 SLCO6A1Q86UG4 719 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 RPUSD2Q8IZ73 545 aaKnown RBP5.83□□□□□ -1.48
PTCH1-216ENST00000548379 Q8N1Y9 231 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 NLGN2Q8NFZ4 835 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 MTFR1LQ9H019 292 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 PCDHA9Q9Y5H5 950 aa5.83□□□□□ -1.48
PTCH1-216ENST00000548379 FUT4P22083 530 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 GUCY1A3Q02108 690 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 ZP2Q05996 745 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 ABHD17CQ6PCB6 329 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 ZNF574Q6ZN55 896 aaPredicted RBP5.82□□□□□ -1.48
PTCH1-216ENST00000548379 ANKLE2Q86XL3 938 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 CPNE8Q86YQ8 564 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 PPM1KQ8N3J5 372 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 PCDH19Q8TAB3 1148 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 CHAC2Q8WUX2 184 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 DPF3Q92784 378 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 ALPK1Q96QP1 1244 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 ADAMTS10Q9H324 1103 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 PAK6Q9NQU5 681 aaPredicted RBP5.82□□□□□ -1.48
PTCH1-216ENST00000548379 FBXL7Q9UJT9 491 aa5.82□□□□□ -1.48
PTCH1-216ENST00000548379 A0A1W2PQ45 241 aaPredicted RBP5.81□□□□□ -1.48
PTCH1-216ENST00000548379 A0A1W2PQY0 241 aa5.81□□□□□ -1.48
PTCH1-216ENST00000548379 NOTOA8MTQ0 251 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms