RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 KIF5CO60282 957 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 CCNE1P24864 410 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 ALDH1B1P30837 517 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 PPP1R2P41236 205 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 PPP2R3AQ06190 1150 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 STK4Q13043 487 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 CSGALNACT2Q8N6G5 542 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 P2RX5Q93086 422 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 TEKT1Q969V4 418 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 LRWD1Q9UFC0 647 aa17.4■□□□□ 0.38
BRF1-212ENST00000547562 TDP2O95551 362 aa17.39■□□□□ 0.37
BRF1-212ENST00000547562 APOBEC3HQ6NTF7 200 aaKnown RBP17.39■□□□□ 0.37
BRF1-212ENST00000547562 ACRBPQ8NEB7 543 aa17.39■□□□□ 0.37
BRF1-212ENST00000547562 RIC8AQ9NPQ8 531 aa17.39■□□□□ 0.37
BRF1-212ENST00000547562 PRDM10Q9NQV6 1147 aa17.39■□□□□ 0.37
BRF1-212ENST00000547562 HLA-DOAP06340 250 aa17.39■□□□□ 0.37
BRF1-212ENST00000547562 CLCN6P51797 869 aa17.39■□□□□ 0.37
BRF1-212ENST00000547562 GRB10Q13322 594 aa17.39■□□□□ 0.37
BRF1-212ENST00000547562 TMEM266Q2M3C6 531 aa17.39■□□□□ 0.37
BRF1-212ENST00000547562 STK17AQ9UEE5 414 aa17.39■□□□□ 0.37
BRF1-212ENST00000547562 TTC26A0AVF1 554 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 PPP1R11O60927 126 aaPredicted RBP17.38■□□□□ 0.37
BRF1-212ENST00000547562 FCER1AP12319 257 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 DNM2P50570 870 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 COBLL1Q53SF7 1204 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 GPATCH4Q5T3I0 446 aaKnown RBP17.38■□□□□ 0.37
BRF1-212ENST00000547562 ANKRD40Q6AI12 368 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 CNNM4Q6P4Q7 775 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 SV2BQ7L1I2 683 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 BLOC1S4Q9NUP1 217 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 FAM53CQ9NYF3 392 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 G3V3G9 751 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 PES1O00541 588 aaKnown RBP17.38■□□□□ 0.37
BRF1-212ENST00000547562 ZSCAN20P17040 1043 aaPredicted RBP17.38■□□□□ 0.37
BRF1-212ENST00000547562 DCAF8Q5TAQ9 597 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 TTBK2Q6IQ55 1244 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 TUBGCP2Q9BSJ2 902 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 RAB34Q9BZG1 259 aa17.38■□□□□ 0.37
BRF1-212ENST00000547562 PDE6BP35913 854 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 TNNI2P48788 182 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 CLK2P49760 499 aaKnown RBP17.37■□□□□ 0.37
BRF1-212ENST00000547562 NFIAQ12857 509 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 PDIA5Q14554 519 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 COL23A1Q86Y22 540 aaPredicted RBP17.37■□□□□ 0.37
BRF1-212ENST00000547562 OR8K1Q8NGG5 319 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 PNMA5Q96PV4 448 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 DNAJC7Q99615 494 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 EHD4Q9H223 541 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 ARGLU1Q9NWB6 273 aaPredicted RBP17.37■□□□□ 0.37
BRF1-212ENST00000547562 CAPN11Q9UMQ6 739 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 LUC7L2Q9Y383 392 aaKnown RBP17.37■□□□□ 0.37
BRF1-212ENST00000547562 SIPA1L1O43166 1804 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 B4DLN1 442 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 MPHOSPH10O00566 681 aaKnown RBP17.37■□□□□ 0.37
BRF1-212ENST00000547562 ZNF569Q5MCW4 686 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 PPP4R3AQ6IN85 833 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 RSRC2Q7L4I2 434 aaKnown RBP17.37■□□□□ 0.37
BRF1-212ENST00000547562 FAM114A1Q8IWE2 563 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 KRT222Q8N1A0 295 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 KIAA0895Q8NCT3 520 aa17.37■□□□□ 0.37
BRF1-212ENST00000547562 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
BRF1-212ENST00000547562 POTEMA6NI47 508 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 ZBTB5O15062 677 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 CRKP46108 304 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 ATP2B2Q01814 1243 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 UBE2SQ16763 222 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 CCDC96Q2M329 555 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 LARP4BQ92615 738 aaKnown RBP17.36■□□□□ 0.37
BRF1-212ENST00000547562 CUL5Q93034 780 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 MTMR8Q96EF0 704 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 MASTLQ96GX5 879 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 CDK5RAP3Q96JB5 506 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 CNOT6LQ96LI5 555 aaKnown RBP17.36■□□□□ 0.37
BRF1-212ENST00000547562 CHP1Q99653 195 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 ARFGEF1Q9Y6D6 1849 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 SLC16A2P36021 539 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 MCM6Q14566 821 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 EEF2KMTQ96G04 330 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 CCDC17Q96LX7 622 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 SLF1Q9BQI6 1058 aa17.36■□□□□ 0.37
BRF1-212ENST00000547562 PVALEFA0A1B0GWK0 134 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 MYMKA6NI61 221 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 USP17L10C9JJH3 530 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 ARHGAP25P42331 645 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 MRPL12P52815 198 aaKnown RBP17.35■□□□□ 0.37
BRF1-212ENST00000547562 UNC13DQ70J99 1090 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 KCTD1Q719H9 257 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 GPR161Q8N6U8 529 aaKnown RBP17.35■□□□□ 0.37
BRF1-212ENST00000547562 HPS3Q969F9 1004 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 AKT1S1Q96B36 256 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 ZDHHC15Q96MV8 337 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 MYO1AQ9UBC5 1043 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 EPN1Q9Y6I3 576 aaPredicted RBP17.35■□□□□ 0.37
BRF1-212ENST00000547562 NDUFA10O95299 355 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 ABL1P00519 1130 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 KRT79Q5XKE5 535 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 PODNQ7Z5L7 613 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 ZFPM1Q8IX07 1006 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 SNX29Q8TEQ0 813 aa17.35■□□□□ 0.37
BRF1-212ENST00000547562 DNAJC18Q9H819 358 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms