RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 STXBP5LQ9Y2K9 1186 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 NT5C2P49902 561 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 FPGSQ05932 587 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 CCDC178Q5BJE1 867 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 C16orf59Q7L2K0 433 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 ADGRF4Q8IZF3 695 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 TBC1D5Q92609 795 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 KAT14Q9H8E8 782 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 Q9Y3F1 56 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 WDR19Q8NEZ3 1342 aa15.64■□□□□ 0.09
CPSF6-204ENST00000547486 RBM47A0AV96 593 aaKnown RBP15.63■□□□□ 0.09
CPSF6-204ENST00000547486 CD4P01730 458 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 PSMC6P62333 389 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 PTH1RQ03431 593 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 CDC37Q16543 378 aaPredicted RBP15.63■□□□□ 0.09
CPSF6-204ENST00000547486 USH1GQ495M9 461 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 DUSP28Q4G0W2 176 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 CYB5R4Q7L1T6 521 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 SLC17A8Q8NDX2 589 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 WDR11Q9BZH6 1224 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 KRT23Q9C075 422 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 PNMA2Q9UL42 364 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 TNKSO95271 1327 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 MROH7Q68CQ1 1323 aa15.63■□□□□ 0.09
CPSF6-204ENST00000547486 EDNRBP24530 442 aa15.62■□□□□ 0.09
CPSF6-204ENST00000547486 CHMLP26374 656 aa15.62■□□□□ 0.09
CPSF6-204ENST00000547486 ITGA7Q13683 1181 aa15.62■□□□□ 0.09
CPSF6-204ENST00000547486 SEC23AQ15436 765 aa15.62■□□□□ 0.09
CPSF6-204ENST00000547486 MFSD5Q6N075 450 aa15.62■□□□□ 0.09
CPSF6-204ENST00000547486 RGS22Q8NE09 1264 aa15.62■□□□□ 0.09
CPSF6-204ENST00000547486 RNPC3Q96LT9 517 aaKnown RBP15.62■□□□□ 0.09
CPSF6-204ENST00000547486 VAT1LQ9HCJ6 419 aa15.62■□□□□ 0.09
CPSF6-204ENST00000547486 LCTP09848 1927 aa15.61■□□□□ 0.09
CPSF6-204ENST00000547486 LOC102724159A0A0B4J2E5 919 aa15.61■□□□□ 0.09
CPSF6-204ENST00000547486 CABYRO75952 493 aa15.61■□□□□ 0.09
CPSF6-204ENST00000547486 SMAD3P84022 425 aaKnown RBP15.61■□□□□ 0.09
CPSF6-204ENST00000547486 PWP2Q15269 919 aaKnown RBP15.61■□□□□ 0.09
CPSF6-204ENST00000547486 STAG2Q8N3U4 1231 aa15.61■□□□□ 0.09
CPSF6-204ENST00000547486 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.61■□□□□ 0.092e-6■■□□□ 12.6
CPSF6-204ENST00000547486 TRPV6Q9H1D0 765 aa15.61■□□□□ 0.09
CPSF6-204ENST00000547486 SEMA6BQ9H3T3 888 aa15.61■□□□□ 0.09
CPSF6-204ENST00000547486 CNNM2Q9H8M5 875 aa15.61■□□□□ 0.09
CPSF6-204ENST00000547486 JMJD4Q9H9V9 463 aa15.61■□□□□ 0.09
CPSF6-204ENST00000547486 TAF6LQ9Y6J9 622 aa15.61■□□□□ 0.09
CPSF6-204ENST00000547486 ZEB2O60315 1214 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 CYP21A2P08686 494 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 PARP1P09874 1014 aaKnown RBP15.6■□□□□ 0.09
CPSF6-204ENST00000547486 CSF2RAP15509 400 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 CYP2C18P33260 490 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 PDE4DQ08499 809 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 QRICH1Q2TAL8 776 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 ASPRV1Q53RT3 343 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 ZNF697Q5TEC3 545 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 DNERQ8NFT8 737 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 COPS5Q92905 334 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 TAAR1Q96RJ0 339 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 UBAC1Q9BSL1 405 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 PPP1R12CQ9BZL4 782 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 TTYH1Q9H313 450 aaPredicted RBP15.6■□□□□ 0.09
CPSF6-204ENST00000547486 COL20A1Q9P218 1284 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 A0A0C4DFX4 3053 aa15.6■□□□□ 0.09
CPSF6-204ENST00000547486 TLR3O15455 904 aaKnown RBP15.59■□□□□ 0.09
CPSF6-204ENST00000547486 B4GALT4O60513 344 aa15.59■□□□□ 0.09
CPSF6-204ENST00000547486 ACRP10323 421 aa15.59■□□□□ 0.09
CPSF6-204ENST00000547486 TMEM240Q5SV17 173 aa15.59■□□□□ 0.09
CPSF6-204ENST00000547486 IFIT1BQ5T764 474 aaKnown RBP15.59■□□□□ 0.09
CPSF6-204ENST00000547486 SYTL5Q8TDW5 730 aaPredicted RBP15.59■□□□□ 0.09
CPSF6-204ENST00000547486 CDX2Q99626 313 aaPredicted RBP15.59■□□□□ 0.09
CPSF6-204ENST00000547486 SENP2Q9HC62 589 aa15.59■□□□□ 0.09
CPSF6-204ENST00000547486 ABCB11O95342 1321 aa15.59■□□□□ 0.09
CPSF6-204ENST00000547486 UMODL1Q5DID0 1318 aa15.59■□□□□ 0.09
CPSF6-204ENST00000547486 LRRC37A2A6NM11 1700 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 ARIH2O95376 493 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 PURAQ00577 322 aaKnown RBP15.58■□□□□ 0.08
CPSF6-204ENST00000547486 SLC35G1Q2M3R5 365 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 ZNF365Q70YC5 407 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 FBXO11Q86XK2 927 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 TMEM199Q8N511 208 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 OR6J1Q8NGC5 347 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 PPP1R13LQ8WUF5 828 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 RUFY2Q8WXA3 655 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 MAD2L2Q9UI95 211 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 RAD50Q92878 1312 aa15.58■□□□□ 0.08
CPSF6-204ENST00000547486 PALM3A6NDB9 673 aaPredicted RBP15.57■□□□□ 0.08
CPSF6-204ENST00000547486 KLRF2D3W0D1 207 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 OPLAHO14841 1288 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 SGSM2O43147 1006 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 DHX16O60231 1041 aaKnown RBP15.57■□□□□ 0.08
CPSF6-204ENST00000547486 PPP1R11O60927 126 aaPredicted RBP15.57■□□□□ 0.08
CPSF6-204ENST00000547486 MYL3P08590 195 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 PPIGQ13427 754 aaKnown RBP eCLIP15.57■□□□□ 0.082e-9■□□□□ 10.2
CPSF6-204ENST00000547486 RASIP1Q5U651 963 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 STOX1Q6ZVD7 989 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 CHST3Q7LGC8 479 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 SCFD2Q8WU76 684 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 MTMR8Q96EF0 704 aa15.57■□□□□ 0.08
CPSF6-204ENST00000547486 NOC4LQ9BVI4 516 aaKnown RBP15.57■□□□□ 0.08
CPSF6-204ENST00000547486 ALDH8A1Q9H2A2 487 aaPredicted RBP15.57■□□□□ 0.08
CPSF6-204ENST00000547486 HIPK3Q9H422 1215 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms