RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CLEC4DQ8WXI8 215 aa18.1■□□□□ 0.49
TRAFD1-203ENST00000547063 HOMER2Q9NSB8 354 aa18.1■□□□□ 0.49
TRAFD1-203ENST00000547063 BIN2Q9UBW5 565 aaPredicted RBP18.1■□□□□ 0.49
TRAFD1-203ENST00000547063 PFASO15067 1338 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 OPLAHO14841 1288 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 HSD17B4P51659 736 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 KRT85P78386 507 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 JAKMIP3Q5VZ66 844 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 USP17L6PQ6QN14 398 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 PIK3AP1Q6ZUJ8 805 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 CCAR1Q8IX12 1150 aaKnown RBP18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 MOV10L1Q9BXT6 1211 aaKnown RBP18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 TXNRD2Q9NNW7 524 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 RIPK3Q9Y572 518 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 SMCHD1A6NHR9 2005 aa18.09■□□□□ 0.49
TRAFD1-203ENST00000547063 MYH15Q9Y2K3 1946 aa18.08■□□□□ 0.49
TRAFD1-203ENST00000547063 NFIBO00712 420 aa18.08■□□□□ 0.48
TRAFD1-203ENST00000547063 UBE2SQ16763 222 aa18.08■□□□□ 0.48
TRAFD1-203ENST00000547063 MUM1L1Q5H9M0 696 aa18.08■□□□□ 0.48
TRAFD1-203ENST00000547063 POTEEQ6S8J3 1075 aa18.08■□□□□ 0.48
TRAFD1-203ENST00000547063 RNF207Q6ZRF8 634 aa18.08■□□□□ 0.48
TRAFD1-203ENST00000547063 NCAPG2Q86XI2 1143 aa18.08■□□□□ 0.48
TRAFD1-203ENST00000547063 ANKRD13CQ8N6S4 541 aa18.08■□□□□ 0.48
TRAFD1-203ENST00000547063 NAP1L4Q99733 375 aaKnown RBP18.08■□□□□ 0.48
TRAFD1-203ENST00000547063 CA12O43570 354 aa18.07■□□□□ 0.48
TRAFD1-203ENST00000547063 TLR2O60603 784 aa18.07■□□□□ 0.48
TRAFD1-203ENST00000547063 BMP15O95972 392 aa18.07■□□□□ 0.48
TRAFD1-203ENST00000547063 ERCC3P19447 782 aa18.07■□□□□ 0.48
TRAFD1-203ENST00000547063 CSPP1Q1MSJ5 1256 aa18.07■□□□□ 0.48
TRAFD1-203ENST00000547063 NSMFQ6X4W1 530 aa18.07■□□□□ 0.48
TRAFD1-203ENST00000547063 RASGRP4Q8TDF6 673 aa18.07■□□□□ 0.48
TRAFD1-203ENST00000547063 ANO3Q9BYT9 981 aa18.07■□□□□ 0.48
TRAFD1-203ENST00000547063 SCAND2PQ9GZW5 306 aaPredicted RBP18.07■□□□□ 0.48
TRAFD1-203ENST00000547063 ADGRA2Q96PE1 1338 aa18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 GOLGA6L22H0YM25 854 aa18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 AOC2O75106 756 aa18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 TAL1P17542 331 aaPredicted RBP18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 NCLP19338 710 aaKnown RBP18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 HOXA13P31271 388 aaPredicted RBP18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 DNM1Q05193 864 aaKnown RBP18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 ORC2Q13416 577 aaPredicted RBP18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 Q3C1V9 767 aa18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 NEK8Q86SG6 692 aa18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 ANKRD35Q8N283 1001 aa18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 TMEM260Q9NX78 707 aa18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 CEP131Q9UPN4 1083 aa18.06■□□□□ 0.48
TRAFD1-203ENST00000547063 STRNO43815 780 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 BAG4O95429 457 aaKnown RBP18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 BCRP11274 1271 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 MAPK4P31152 587 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 VEGFBP49765 207 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 USP11P51784 963 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 RPS6P62753 249 aaKnown RBP18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 KCTD2Q14681 263 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 INF2Q27J81 1249 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 FOXD4L6Q3SYB3 417 aaPredicted RBP18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 FOXD4L3Q6VB84 417 aaPredicted RBP18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 FCHSD1Q86WN1 690 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 TBCKQ8TEA7 893 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 ZIC5Q96T25 663 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 POLR3EQ9NVU0 708 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 CYP39A1Q9NYL5 469 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 RTEL1Q9NZ71 1219 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 IVNS1ABPQ9Y6Y0 642 aa18.05■□□□□ 0.48
TRAFD1-203ENST00000547063 FCER1AP12319 257 aa18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 GCFC2P16383 781 aaKnown RBP18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 HSPA6P17066 643 aa18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 SREBF1P36956 1147 aa18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 BAATQ14032 418 aaPredicted RBP18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 EARS2Q5JPH6 523 aaKnown RBP18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 TTC38Q5R3I4 469 aa18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 WDR78Q5VTH9 848 aa18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 FAM173BQ6P4H8 233 aa18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 ABRAQ8N0Z2 381 aa18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 SYTL5Q8TDW5 730 aaPredicted RBP18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 TBC1D5Q92609 795 aa18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 A1CFQ9NQ94 594 aaKnown RBP18.04■□□□□ 0.48
TRAFD1-203ENST00000547063 B4DLN1 442 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 ADAMTS3O15072 1205 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 YEATS4O95619 227 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 C1QTNF8P60827 252 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 CRHR2Q13324 411 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 ANO1Q5XXA6 986 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 MOXD1Q6UVY6 613 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 C17orf99Q6UX52 265 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 JMYQ8N9B5 988 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 DNERQ8NFT8 737 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 MMP19Q99542 508 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 MPHOSPH6Q99547 160 aaKnown RBP18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 CFHR5Q9BXR6 569 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 CPA4Q9UI42 421 aa18.03■□□□□ 0.48
TRAFD1-203ENST00000547063 THSD7BQ9C0I4 1608 aa18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 FAM205CA6NFA0 338 aa18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 PEX10O60683 326 aa18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 CYP3A4P08684 503 aa18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 ATP2B1P20020 1258 aa18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 TOB1P50616 345 aaPredicted RBP18.02■□□□□ 0.48
TRAFD1-203ENST00000547063 ARHGAP4P98171 946 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms