RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
SCAF11-209ENST00000547018 KCNK18Q7Z418 384 aa14.28□□□□□ -0.12
SCAF11-209ENST00000547018 TBC1D5Q92609 795 aa14.28□□□□□ -0.12
SCAF11-209ENST00000547018 CUL5Q93034 780 aa14.28□□□□□ -0.12
SCAF11-209ENST00000547018 CASZ1Q86V15 1759 aa14.28□□□□□ -0.12
SCAF11-209ENST00000547018 PNMA6FA0A0J9YX94 578 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 RNF225M0QZC1 329 aaPredicted RBP14.27□□□□□ -0.12
SCAF11-209ENST00000547018 ZNF18P17022 549 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 KLK7P49862 253 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 MRPL12P52815 198 aaKnown RBP14.27□□□□□ -0.12
SCAF11-209ENST00000547018 STIM1Q13586 685 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 PRKG1Q13976 671 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 ELF2Q15723 593 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 TMC4Q7Z404 712 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 SH3RF1Q7Z6J0 888 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 CPXCR1Q8N123 301 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 TC2NQ8N9U0 490 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 TRIML1Q8N9V2 468 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 ACRBPQ8NEB7 543 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 CYP2W1Q8TAV3 490 aa14.27□□□□□ -0.12
SCAF11-209ENST00000547018 NOC3LQ8WTT2 800 aaKnown RBP14.27□□□□□ -0.12
SCAF11-209ENST00000547018 SBF2Q86WG5 1849 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 KLRG2A4D1S0 409 aaPredicted RBP14.27□□□□□ -0.13
SCAF11-209ENST00000547018 B4DLN1 442 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 AKR1B15C9JRZ8 316 aaPredicted RBP14.27□□□□□ -0.13
SCAF11-209ENST00000547018 PSMA7O14818 248 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 IGSF3O75054 1194 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 STRIP1Q5VSL9 837 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 KRT79Q5XKE5 535 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 ARL6IP4Q66PJ3 421 aaKnown RBP14.27□□□□□ -0.13
SCAF11-209ENST00000547018 HHIPL2Q6UWX4 724 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 PDCL2Q8N4E4 241 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 FLAD1Q8NFF5 587 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 PCDHA12Q9UN75 941 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 PPP2R2CQ9Y2T4 447 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 GJA3Q9Y6H8 435 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 THSD7AQ9UPZ6 1657 aa14.27□□□□□ -0.13
SCAF11-209ENST00000547018 E9PMD0 336 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 TFRCP02786 760 aaKnown RBP14.26□□□□□ -0.13
SCAF11-209ENST00000547018 TPM1P09493 284 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 ERCC5P28715 1186 aaPredicted RBP14.26□□□□□ -0.13
SCAF11-209ENST00000547018 ZNF658Q5TYW1 1059 aaPredicted RBP14.26□□□□□ -0.13
SCAF11-209ENST00000547018 CCDC47Q96A33 483 aaKnown RBP14.26□□□□□ -0.13
SCAF11-209ENST00000547018 SLF1Q9BQI6 1058 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 FBXO28Q9NVF7 368 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 KIAA1024Q9UPX6 916 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 ZBTB5O15062 677 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 NDUFB10O96000 172 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 KRT9P35527 623 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 ERCC6LQ2NKX8 1250 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 NT5DC1Q5TFE4 455 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 NCAPH2Q6IBW4 605 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 SV2BQ7L1I2 683 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 FEZ1Q99689 392 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 RIOX1Q9H6W3 641 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 BMP2KQ9NSY1 1161 aaPredicted RBP14.26□□□□□ -0.13
SCAF11-209ENST00000547018 DDX39AO00148 427 aaKnown RBP14.26□□□□□ -0.13
SCAF11-209ENST00000547018 COPB1P53618 953 aaKnown RBP14.26□□□□□ -0.13
SCAF11-209ENST00000547018 CERS3Q8IU89 383 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 TTLL6Q8N841 843 aa14.26□□□□□ -0.13
SCAF11-209ENST00000547018 BRWD3Q6RI45 1802 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 MYH1P12882 1939 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 A0A1W2PRG0 241 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 NR1I3Q14994 352 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 ZDHHC15Q96MV8 337 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 GLIS2Q9BZE0 524 aaPredicted RBP14.25□□□□□ -0.13
SCAF11-209ENST00000547018 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
SCAF11-209ENST00000547018 POTEB3A0JP26 581 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 POTECB2RU33 542 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 M0R2N6 131 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 TBC1D10BQ4KMP7 808 aaPredicted RBP14.25□□□□□ -0.13
SCAF11-209ENST00000547018 FAM83BQ5T0W9 1011 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 POTEBQ6S5H4 581 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 MNS1Q8NEH6 495 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 WDR24Q96S15 920 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 RMND1Q9NWS8 449 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 ADD3Q9UEY8 706 aaKnown RBP14.25□□□□□ -0.13
SCAF11-209ENST00000547018 SWAP70Q9UH65 585 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 UBR3Q6ZT12 1888 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 ROBO3Q96MS0 1386 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 ABL1P00519 1130 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 TRIM21P19474 475 aaKnown RBP14.25□□□□□ -0.13
SCAF11-209ENST00000547018 NBPF9Q3BBW0 867 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 MAEAQ7L5Y9 396 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 TRIM9Q9C026 710 aa14.25□□□□□ -0.13
SCAF11-209ENST00000547018 MYMKA6NI61 221 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 SFI1A8K8P3 1242 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 ECM1Q16610 540 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 ANKRD40Q6AI12 368 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 SPATA20Q8TB22 786 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 SH2D3AQ9BRG2 576 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 CRACR2AQ9BSW2 395 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 FAM207AQ9NSI2 230 aaPredicted RBP14.24□□□□□ -0.13
SCAF11-209ENST00000547018 SMCHD1A6NHR9 2005 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 SPDYE3A6NKU9 549 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 TCP11X2Q5H9J9 407 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 CC2D2BQ6DHV5 1058 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 MMTAG2Q9BU76 263 aaKnown RBP14.24□□□□□ -0.13
SCAF11-209ENST00000547018 CARD6Q9BX69 1037 aa14.24□□□□□ -0.13
SCAF11-209ENST00000547018 BCS1LQ9Y276 419 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms