RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 EXOSC10Q01780 885 aaKnown RBP17.84■□□□□ 0.45
SSH1-204ENST00000546697 HABP4Q5JVS0 413 aaKnown RBP17.84■□□□□ 0.45
SSH1-204ENST00000546697 ANO1Q5XXA6 986 aa17.84■□□□□ 0.45
SSH1-204ENST00000546697 IQSEC1Q6DN90 963 aa17.84■□□□□ 0.45
SSH1-204ENST00000546697 CATIPQ7Z7H3 387 aa17.84■□□□□ 0.45
SSH1-204ENST00000546697 FBXO11Q86XK2 927 aa17.84■□□□□ 0.45
SSH1-204ENST00000546697 MCF2L2Q86YR7 1114 aa17.84■□□□□ 0.45
SSH1-204ENST00000546697 SPZ1Q9BXG8 430 aa17.84■□□□□ 0.45
SSH1-204ENST00000546697 ZHX1Q9UKY1 873 aaPredicted RBP17.84■□□□□ 0.45
SSH1-204ENST00000546697 COLQQ9Y215 455 aaPredicted RBP17.84■□□□□ 0.45
SSH1-204ENST00000546697 MRPL11Q9Y3B7 192 aaKnown RBP17.84■□□□□ 0.45
SSH1-204ENST00000546697 PGK1P00558 417 aa17.83■□□□□ 0.44
SSH1-204ENST00000546697 CHST3Q7LGC8 479 aa17.83■□□□□ 0.44
SSH1-204ENST00000546697 ZNF654Q8IZM8 581 aa17.83■□□□□ 0.44
SSH1-204ENST00000546697 FBXL16Q8N461 479 aa17.83■□□□□ 0.44
SSH1-204ENST00000546697 PURBQ96QR8 312 aaKnown RBP17.83■□□□□ 0.44
SSH1-204ENST00000546697 MYH6P13533 1939 aa17.82■□□□□ 0.44
SSH1-204ENST00000546697 ELP1O95163 1332 aa17.82■□□□□ 0.44
SSH1-204ENST00000546697 ADCYAP1R1P41586 468 aa17.82■□□□□ 0.44
SSH1-204ENST00000546697 KRT32Q14532 448 aa17.82■□□□□ 0.44
SSH1-204ENST00000546697 RASEFQ8IZ41 740 aa17.82■□□□□ 0.44
SSH1-204ENST00000546697 SYTL5Q8TDW5 730 aaPredicted RBP17.82■□□□□ 0.44
SSH1-204ENST00000546697 LENG1Q96BZ8 264 aaPredicted RBP17.82■□□□□ 0.44
SSH1-204ENST00000546697 LZTS2Q9BRK4 669 aa17.82■□□□□ 0.44
SSH1-204ENST00000546697 PNMA6FA0A0J9YX94 578 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 A0A1W2PQ45 241 aaPredicted RBP17.81■□□□□ 0.44
SSH1-204ENST00000546697 A0A1W2PQY0 241 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 PTPDC1A2A3K4 754 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 B4DLN1 442 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 CALM1P0DP23 149 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 CALM2P0DP24 149 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 CALM3P0DP25 149 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 KIF5BP33176 963 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 HSPA4P34932 840 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 MRPL12P52815 198 aaKnown RBP17.81■□□□□ 0.44
SSH1-204ENST00000546697 ACLYP53396 1101 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 RCAN1P53805 252 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 TNFAIP2Q03169 654 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 USH1GQ495M9 461 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 DUSP28Q4G0W2 176 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 ANKRD33Q7Z3H0 272 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 C7orf61Q8IZ16 206 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 PCSK9Q8NBP7 692 aaKnown RBP17.81■□□□□ 0.44
SSH1-204ENST00000546697 TOX2Q96NM4 488 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 NEK1Q96PY6 1258 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 IWS1Q96ST2 819 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 GPHNQ9NQX3 736 aaPredicted RBP17.81■□□□□ 0.44
SSH1-204ENST00000546697 TRIOBPQ9H2D6 2365 aa17.81■□□□□ 0.44
SSH1-204ENST00000546697 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.8■□□□□ 0.44
SSH1-204ENST00000546697 HMGB1P09429 215 aaKnown RBP17.8■□□□□ 0.44
SSH1-204ENST00000546697 SMPD1P17405 629 aa17.8■□□□□ 0.44
SSH1-204ENST00000546697 GNAQP50148 359 aa17.8■□□□□ 0.44
SSH1-204ENST00000546697 RTP1P59025 263 aa17.8■□□□□ 0.44
SSH1-204ENST00000546697 DHX32Q7L7V1 743 aaKnown RBP17.8■□□□□ 0.44
SSH1-204ENST00000546697 TBC1D5Q92609 795 aa17.8■□□□□ 0.44
SSH1-204ENST00000546697 MPHOSPH6Q99547 160 aaKnown RBP17.8■□□□□ 0.44
SSH1-204ENST00000546697 SEZ6LQ9BYH1 1024 aa17.8■□□□□ 0.44
SSH1-204ENST00000546697 SPC25Q9HBM1 224 aa17.8■□□□□ 0.44
SSH1-204ENST00000546697 COL20A1Q9P218 1284 aa17.8■□□□□ 0.44
SSH1-204ENST00000546697 PCDH10Q9P2E7 1040 aa17.8■□□□□ 0.44
SSH1-204ENST00000546697 FRMPD4Q14CM0 1322 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 MYADML2A6NDP7 307 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 NKRFO15226 690 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSH1-204ENST00000546697 CENPBP07199 599 aaPredicted RBP17.79■□□□□ 0.44
SSH1-204ENST00000546697 CALML3P27482 149 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 CDK7P50613 346 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 KCNA10Q16322 511 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 ADCK5Q3MIX3 580 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 CHRDL2Q6WN34 429 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 TEX2Q8IWB9 1127 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 FBXO16Q8IX29 292 aaPredicted RBP17.79■□□□□ 0.44
SSH1-204ENST00000546697 SLC43A3Q8NBI5 491 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 CTCFLQ8NI51 663 aaPredicted RBP17.79■□□□□ 0.44
SSH1-204ENST00000546697 NSUN6Q8TEA1 469 aaKnown RBP17.79■□□□□ 0.44
SSH1-204ENST00000546697 NUP133Q8WUM0 1156 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 PIGSQ96S52 555 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 AGXT2Q9BYV1 514 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 PDGFCQ9NRA1 345 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 RBM27Q9P2N5 1060 aaKnown RBP17.79■□□□□ 0.44
SSH1-204ENST00000546697 PCDHA1Q9Y5I3 950 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 LTBP2Q14767 1821 aa17.79■□□□□ 0.44
SSH1-204ENST00000546697 SZT2Q5T011 3432 aa17.78■□□□□ 0.44
SSH1-204ENST00000546697 CABYRO75952 493 aa17.78■□□□□ 0.44
SSH1-204ENST00000546697 REC8O95072 547 aa17.78■□□□□ 0.44
SSH1-204ENST00000546697 TLK2Q86UE8 772 aa17.78■□□□□ 0.44
SSH1-204ENST00000546697 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
SSH1-204ENST00000546697 DDX49Q9Y6V7 483 aaKnown RBP17.78■□□□□ 0.44
SSH1-204ENST00000546697 NID2Q14112 1375 aa17.78■□□□□ 0.44
SSH1-204ENST00000546697 CCDC69A6NI79 296 aa17.77■□□□□ 0.44
SSH1-204ENST00000546697 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.44
SSH1-204ENST00000546697 ASGR1P07306 291 aa17.77■□□□□ 0.44
SSH1-204ENST00000546697 C6orf222P0C671 652 aaPredicted RBP17.77■□□□□ 0.44
SSH1-204ENST00000546697 CCDC62Q6P9F0 684 aa17.77■□□□□ 0.44
SSH1-204ENST00000546697 APOA5Q6Q788 366 aa17.77■□□□□ 0.44
SSH1-204ENST00000546697 SCFD2Q8WU76 684 aa17.77■□□□□ 0.44
SSH1-204ENST00000546697 TAAR1Q96RJ0 339 aa17.77■□□□□ 0.44
SSH1-204ENST00000546697 BAZ2BQ9UIF8 2168 aaKnown RBP17.76■□□□□ 0.43
SSH1-204ENST00000546697 PIK3CDO00329 1044 aa17.76■□□□□ 0.43
SSH1-204ENST00000546697 FXR1P51114 621 aaKnown RBP eCLIP17.76■□□□□ 0.43
SSH1-204ENST00000546697 ATN1P54259 1190 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms