RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 IWS1Q96ST2 819 aa18.16■□□□□ 0.5
SCRIB-208ENST00000546337 UPF2Q9HAU5 1272 aaKnown RBP18.16■□□□□ 0.5
SCRIB-208ENST00000546337 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.16■□□□□ 0.5
SCRIB-208ENST00000546337 DDX20Q9UHI6 824 aaKnown RBP18.16■□□□□ 0.5
SCRIB-208ENST00000546337 PPP1R11O60927 126 aaPredicted RBP18.15■□□□□ 0.5
SCRIB-208ENST00000546337 CAPN15O75808 1086 aa18.15■□□□□ 0.5
SCRIB-208ENST00000546337 PLEKHA8P1O95397 391 aa18.15■□□□□ 0.5
SCRIB-208ENST00000546337 SNAI1O95863 264 aaPredicted RBP18.15■□□□□ 0.5
SCRIB-208ENST00000546337 RXRAP19793 462 aa18.15■□□□□ 0.5
SCRIB-208ENST00000546337 PDIA3P30101 505 aaKnown RBP18.15■□□□□ 0.5
SCRIB-208ENST00000546337 HSD17B4P51659 736 aa18.15■□□□□ 0.5
SCRIB-208ENST00000546337 FUT2Q10981 343 aa18.15■□□□□ 0.5
SCRIB-208ENST00000546337 ACVR2BQ13705 512 aa18.15■□□□□ 0.5
SCRIB-208ENST00000546337 TOB2Q14106 344 aaPredicted RBP18.15■□□□□ 0.5
SCRIB-208ENST00000546337 LHX8Q68G74 356 aa18.15■□□□□ 0.5
SCRIB-208ENST00000546337 ARMCX2Q7L311 632 aa18.15■□□□□ 0.5
SCRIB-208ENST00000546337 SYTL5Q8TDW5 730 aaPredicted RBP18.15■□□□□ 0.5
SCRIB-208ENST00000546337 FAM217BQ9NTX9 383 aaPredicted RBP18.15■□□□□ 0.5
SCRIB-208ENST00000546337 FAM184BQ9ULE4 1060 aa18.15■□□□□ 0.5
SCRIB-208ENST00000546337 ZNF865P0CJ78 1059 aaPredicted RBP18.14■□□□□ 0.49
SCRIB-208ENST00000546337 AKR1A1P14550 325 aa18.14■□□□□ 0.49
SCRIB-208ENST00000546337 EN2P19622 333 aaPredicted RBP18.14■□□□□ 0.49
SCRIB-208ENST00000546337 CCND3P30281 292 aaPredicted RBP18.14■□□□□ 0.49
SCRIB-208ENST00000546337 ALDH5A1P51649 535 aaPredicted RBP18.14■□□□□ 0.49
SCRIB-208ENST00000546337 CPLX2Q6PUV4 134 aaKnown RBP18.14■□□□□ 0.49
SCRIB-208ENST00000546337 CCDC144CPQ8IYA2 1237 aa18.14■□□□□ 0.49
SCRIB-208ENST00000546337 ARRDC4Q8NCT1 418 aa18.14■□□□□ 0.49
SCRIB-208ENST00000546337 TRPV1Q8NER1 839 aa18.14■□□□□ 0.49
SCRIB-208ENST00000546337 NSUN6Q8TEA1 469 aaKnown RBP18.14■□□□□ 0.49
SCRIB-208ENST00000546337 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.49
SCRIB-208ENST00000546337 GLT8D2Q9H1C3 349 aa18.14■□□□□ 0.49
SCRIB-208ENST00000546337 VTA1Q9NP79 307 aa18.14■□□□□ 0.49
SCRIB-208ENST00000546337 RBBP6Q7Z6E9 1792 aaKnown RBP18.14■□□□□ 0.49
SCRIB-208ENST00000546337 GCOM1H8Y6P7 765 aaPredicted RBP18.13■□□□□ 0.49
SCRIB-208ENST00000546337 PIK3CDO00329 1044 aa18.13■□□□□ 0.49
SCRIB-208ENST00000546337 MYCP01106 439 aaPredicted RBP18.13■□□□□ 0.49
SCRIB-208ENST00000546337 POLR2MP0CAP2 368 aa18.13■□□□□ 0.49
SCRIB-208ENST00000546337 IFNAR1P17181 557 aa18.13■□□□□ 0.49
SCRIB-208ENST00000546337 EDNRBP24530 442 aa18.13■□□□□ 0.49
SCRIB-208ENST00000546337 CALML3P27482 149 aa18.13■□□□□ 0.49
SCRIB-208ENST00000546337 CNGA1P29973 690 aa18.13■□□□□ 0.49
SCRIB-208ENST00000546337 CDC27P30260 824 aa18.13■□□□□ 0.49
SCRIB-208ENST00000546337 ADD1P35611 737 aaKnown RBP18.13■□□□□ 0.49
SCRIB-208ENST00000546337 RBM25P49756 843 aaKnown RBP18.13■□□□□ 0.49
SCRIB-208ENST00000546337 IQSEC1Q6DN90 963 aa18.13■□□□□ 0.49
SCRIB-208ENST00000546337 PPP1R18Q6NYC8 613 aa18.13■□□□□ 0.49
SCRIB-208ENST00000546337 FAM177A1Q8N128 213 aaPredicted RBP18.13■□□□□ 0.49
SCRIB-208ENST00000546337 NAP1L2Q9ULW6 460 aaPredicted RBP18.13■□□□□ 0.49
SCRIB-208ENST00000546337 OPLAHO14841 1288 aa18.12■□□□□ 0.49
SCRIB-208ENST00000546337 PRPF3O43395 683 aaKnown RBP18.12■□□□□ 0.49
SCRIB-208ENST00000546337 CFBP00751 764 aa18.12■□□□□ 0.49
SCRIB-208ENST00000546337 SLC30A10Q6XR72 485 aa18.12■□□□□ 0.49
SCRIB-208ENST00000546337 SHISA4Q96DD7 197 aa18.12■□□□□ 0.49
SCRIB-208ENST00000546337 RNF26Q9BY78 433 aaPredicted RBP18.12■□□□□ 0.49
SCRIB-208ENST00000546337 C22orf23Q9BZE7 217 aa18.12■□□□□ 0.49
SCRIB-208ENST00000546337 KATNBL1Q9H079 304 aa18.12■□□□□ 0.49
SCRIB-208ENST00000546337 Q9Y3F1 56 aa18.12■□□□□ 0.49
SCRIB-208ENST00000546337 V9GY48 417 aaPredicted RBP18.12■□□□□ 0.49
SCRIB-208ENST00000546337 DUSP11O75319 330 aaKnown RBP18.11■□□□□ 0.49
SCRIB-208ENST00000546337 RARBP10826 455 aa18.11■□□□□ 0.49
SCRIB-208ENST00000546337 MLLT1Q03111 559 aaPredicted RBP18.11■□□□□ 0.49
SCRIB-208ENST00000546337 PRAMEF19Q5SWL8 479 aa18.11■□□□□ 0.49
SCRIB-208ENST00000546337 MCTP2Q6DN12 878 aa18.11■□□□□ 0.49
SCRIB-208ENST00000546337 UBE2Q1Q7Z7E8 422 aa18.11■□□□□ 0.49
SCRIB-208ENST00000546337 TBC1D5Q92609 795 aa18.11■□□□□ 0.49
SCRIB-208ENST00000546337 CUL5Q93034 780 aa18.11■□□□□ 0.49
SCRIB-208ENST00000546337 RMDN3Q96TC7 470 aa18.11■□□□□ 0.49
SCRIB-208ENST00000546337 CNTNAP5Q8WYK1 1306 aa18.11■□□□□ 0.49
SCRIB-208ENST00000546337 BAZ2BQ9UIF8 2168 aaKnown RBP18.11■□□□□ 0.49
SCRIB-208ENST00000546337 SMCHD1A6NHR9 2005 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 ASTN1O14525 1302 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 RBM47A0AV96 593 aaKnown RBP18.1■□□□□ 0.49
SCRIB-208ENST00000546337 NEK4P51957 841 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 NKX3-2P78367 333 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 AKAP17AQ02040 695 aaKnown RBP18.1■□□□□ 0.49
SCRIB-208ENST00000546337 PDE4DQ08499 809 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 NTRK3Q16288 839 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 XRRA1Q6P2D8 792 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 RAB11FIP4Q86YS3 637 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 CCDC82Q8N4S0 544 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 CCDC12Q8WUD4 166 aaPredicted RBP18.1■□□□□ 0.49
SCRIB-208ENST00000546337 PSTPIP2Q9H939 334 aa18.1■□□□□ 0.49
SCRIB-208ENST00000546337 CPLX1O14810 134 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 NKRFO15226 690 aaKnown RBP eCLIP18.09■□□□□ 0.49
SCRIB-208ENST00000546337 EIF3JO75822 258 aaKnown RBP18.09■□□□□ 0.49
SCRIB-208ENST00000546337 CDKL5O76039 1030 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 TAL1P17542 331 aaPredicted RBP18.09■□□□□ 0.49
SCRIB-208ENST00000546337 STXBP2Q15833 593 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 PFKFB3Q16875 520 aaPredicted RBP18.09■□□□□ 0.49
SCRIB-208ENST00000546337 ARHGEF16Q5VV41 709 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 NECAB2Q7Z6G3 386 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 TRIM22Q8IYM9 498 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 CMTR1Q8N1G2 835 aaKnown RBP18.09■□□□□ 0.49
SCRIB-208ENST00000546337 TAAR1Q96RJ0 339 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 SPC25Q9HBM1 224 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 BARHL2Q9NY43 387 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 ZHX1Q9UKY1 873 aaPredicted RBP18.09■□□□□ 0.49
SCRIB-208ENST00000546337 PLXNA1Q9UIW2 1896 aa18.09■□□□□ 0.49
SCRIB-208ENST00000546337 PFKFB2O60825 505 aa18.08■□□□□ 0.48
SCRIB-208ENST00000546337 STAM2O75886 525 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms